RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 BPIFB1Q8TDL5 484 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 CHFRQ96EP1 664 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 TASP1Q9H6P5 420 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 FBRSL1Q9HCM7 1045 aaKnown RBP13.26□□□□□ -0.29
HDAC3-204ENST00000469207 SEMA4GQ9NTN9 838 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 ABI2Q9NYB9 513 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-204ENST00000469207 AGO2Q9UKV8 859 aaKnown RBP13.26□□□□□ -0.29
HDAC3-204ENST00000469207 KIF26AQ9ULI4 1882 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-204ENST00000469207 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 HCRTO43612 131 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 TBCAO75347 108 aaKnown RBP13.25□□□□□ -0.29
HDAC3-204ENST00000469207 KRT37O76014 449 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 RETP07949 1114 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 HAPLN1P10915 354 aaPredicted RBP13.25□□□□□ -0.29
HDAC3-204ENST00000469207 TUFMP49411 452 aaKnown RBP13.25□□□□□ -0.29
HDAC3-204ENST00000469207 TAF6P49848 677 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 CCINQ13939 588 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 LRRC32Q14392 662 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 TAF12Q16514 161 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 CCDC142Q17RM4 750 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 ARHGAP15Q53QZ3 475 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 NAIF1Q69YI7 327 aaPredicted RBP13.25□□□□□ -0.29
HDAC3-204ENST00000469207 TXNDC8Q6A555 127 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 ZNF720Q7Z2F6 126 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 ITIH5Q86UX2 942 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 LONP2Q86WA8 852 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 SFR1Q86XK3 245 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 THEM5Q8N1Q8 247 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
HDAC3-204ENST00000469207 TSPAN18Q96SJ8 248 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 PI4K2AQ9BTU6 479 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 EBF3Q9H4W6 596 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 ASB7Q9H672 318 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 HPS4Q9NQG7 708 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 MAGED2Q9UNF1 606 aaPredicted RBP13.25□□□□□ -0.29
HDAC3-204ENST00000469207 SMC3Q9UQE7 1217 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 STYXL1Q9Y6J8 313 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 ATG2BQ96BY7 2078 aa13.25□□□□□ -0.29
HDAC3-204ENST00000469207 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 AXIN1O15169 862 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 F11P03951 625 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 HMGA1P17096 107 aaKnown RBP13.24□□□□□ -0.29
HDAC3-204ENST00000469207 ACAT1P24752 427 aaKnown RBP13.24□□□□□ -0.29
HDAC3-204ENST00000469207 LONP1P36776 959 aaKnown RBP13.24□□□□□ -0.29
HDAC3-204ENST00000469207 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 FAM173BQ6P4H8 233 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 CMTM8Q8IZV2 173 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 FAM160A2Q8N612 972 aaPredicted RBP13.24□□□□□ -0.29
HDAC3-204ENST00000469207 POMGNT1Q8WZA1 660 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
HDAC3-204ENST00000469207 SAAL1Q96ER3 474 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 CLIC6Q96NY7 704 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 FAM83CQ9BQN1 747 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 RTKNQ9BST9 563 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 IER2Q9BTL4 223 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 FGFBP2Q9BYJ0 223 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 OBP2AQ9NY56 170 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 HSFX1Q9UBD0 423 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 DERAQ9Y315 318 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 TSC2P49815 1807 aa13.24□□□□□ -0.29
HDAC3-204ENST00000469207 GOLGA8IPA6NC78 632 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 MYMKA6NI61 221 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 GOLGA8JA6NMD2 632 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
HDAC3-204ENST00000469207 ARSAP15289 507 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 SDHBP21912 280 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 CYP2F1P24903 491 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 CDC25CP30307 473 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 NLRP12P59046 1061 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 RUNX3Q13761 415 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 VEPH1Q14D04 833 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 DDR2Q16832 855 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 ITPRIPL2Q3MIP1 535 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 SLFN12LQ6IEE8 588 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.23□□□□□ -0.29
HDAC3-204ENST00000469207 OSTM1Q86WC4 334 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
HDAC3-204ENST00000469207 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 CYP2S1Q96SQ9 504 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 FAM213AQ9BRX8 229 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 STRA6Q9BX79 667 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 CCSER1Q9C0I3 900 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 RXFP3Q9NSD7 469 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 DSEQ9UL01 958 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
HDAC3-204ENST00000469207 ANTXRLA6NF34 631 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 SLC26A4O43511 780 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 PPP1R37O75864 691 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 PAPSS2O95340 614 aaPredicted RBP13.22□□□□□ -0.29
HDAC3-204ENST00000469207 FGF19O95750 216 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 EGFP01133 1207 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 ITGB3P05106 788 aa13.22□□□□□ -0.29
HDAC3-204ENST00000469207 WEE1P30291 646 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms