RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 SUSD2Q9UGT4 822 aa11.62□□□□□ -0.55
TRAIP-202ENST00000469027 TBX20Q9UMR3 447 aa11.62□□□□□ -0.55
TRAIP-202ENST00000469027 GDAQ9Y2T3 454 aa11.62□□□□□ -0.55
TRAIP-202ENST00000469027 NUB1Q9Y5A7 615 aa11.62□□□□□ -0.55
TRAIP-202ENST00000469027 A0A1B0GUA9 196 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 SYN3O14994 580 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 EDIL3O43854 480 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 HNRNPLP14866 589 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAIP-202ENST00000469027 GNSP15586 552 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 CCR10P46092 362 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 KCNH2Q12809 1159 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 PDGFRLQ15198 375 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 SMAD1Q15797 465 aaKnown RBP11.61□□□□□ -0.55
TRAIP-202ENST00000469027 RTN1Q16799 776 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 UPP1Q16831 310 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 CREB3L3Q68CJ9 461 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 CD300LGQ6UXG3 332 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 ZNF574Q6ZN55 896 aaPredicted RBP11.61□□□□□ -0.55
TRAIP-202ENST00000469027 SPACA3Q8IXA5 215 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 REXO1Q8N1G1 1221 aaKnown RBP11.61□□□□□ -0.55
TRAIP-202ENST00000469027 SLC5A5Q92911 643 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 MED8Q96G25 268 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 LGMNQ99538 433 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 ECT2Q9H8V3 914 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 BRPF3Q9ULD4 1205 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 CCL26Q9Y258 94 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
TRAIP-202ENST00000469027 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
TRAIP-202ENST00000469027 TCRBV21S2A2A0A5A6 115 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 DKK1O94907 266 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 KLF8O95600 359 aaPredicted RBP11.6□□□□□ -0.55
TRAIP-202ENST00000469027 JUPP14923 745 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 CDC27P30260 824 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 WEE1P30291 646 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 CIITAP33076 1130 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 HNF1BP35680 557 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 DUSP4Q13115 394 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 BROXQ5VW32 411 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 DNAJB7Q7Z6W7 309 aaPredicted RBP11.6□□□□□ -0.55
TRAIP-202ENST00000469027 NOSTRINQ8IVI9 506 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 ALLCQ8N6M5 410 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 TRIML1Q8N9V2 468 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 TXNDC5Q8NBS9 432 aaKnown RBP11.6□□□□□ -0.55
TRAIP-202ENST00000469027 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
TRAIP-202ENST00000469027 FGF11Q92914 225 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 TCEANC2Q96MN5 208 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 ADPGKQ9BRR6 497 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 ZDHHC5Q9C0B5 715 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 FAM124BQ9H5Z6 455 aaPredicted RBP11.6□□□□□ -0.55
TRAIP-202ENST00000469027 TM7SF3Q9NS93 570 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 PPME1Q9Y570 386 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 PLXND1Q9Y4D7 1925 aa11.6□□□□□ -0.55
TRAIP-202ENST00000469027 ESYT2A0FGR8 921 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 ANTXRLA6NF34 631 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 FLRT2O43155 660 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 ZBTB43O43298 467 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 DKC1O60832 514 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 PSMD10O75832 226 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 CDC25CP30307 473 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 QARSP47897 775 aaKnown RBP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 TMPRSS3P57727 454 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 NFATC3Q12968 1075 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 CAPSQ13938 189 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 TAF12Q16514 161 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 PFKFB3Q16875 520 aaPredicted RBP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 PKDCCQ504Y2 493 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 XKR9Q5GH70 373 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 ITIH5Q86UX2 942 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 TMPRSS12Q86WS5 348 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 SLC41A1Q8IVJ1 513 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 BAHD1Q8TBE0 780 aaPredicted RBP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 PSMG2Q969U7 264 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 TMEM176AQ96HP8 235 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 NAF1Q96HR8 494 aaKnown RBP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 ZMYND12Q9H0C1 365 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 GAREM1Q9H706 876 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 IL21RQ9HBE5 538 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 CPNE5Q9HCH3 593 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 C6orf50Q9HD87 102 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAIP-202ENST00000469027 SLC27A5Q9Y2P5 690 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 ASB3Q9Y575 518 aa11.59□□□□□ -0.55
TRAIP-202ENST00000469027 K7EQS6 105 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 PODXLO00592 558 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 N4BP3O15049 544 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 CILPO75339 1184 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 SOAT2O75908 522 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 CER1O95813 267 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 OR4Q2P0C623 313 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 MYF5P13349 255 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 MARCKSP29966 332 aaPredicted RBP11.58□□□□□ -0.56
TRAIP-202ENST00000469027 MCM4P33991 863 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 TIE1P35590 1138 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 IFNAR2P48551 515 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 USP11P51784 963 aa11.58□□□□□ -0.56
TRAIP-202ENST00000469027 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms