RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 XPOTO43592 962 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 RPS6KA5O75582 802 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 CD4P01730 458 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FAM153BP0C7A2 387 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 CYP2C9P11712 490 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 AKR1A1P14550 325 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ATF7P17544 494 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ITIH2P19823 946 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 BRD2P25440 801 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 PNPLA4P41247 253 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 GPD2P43304 727 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 YARSP54577 528 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 SNX16P57768 344 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 GJA9P57773 515 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 LMNB2Q03252 620 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 TAZQ16635 292 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FAM153CQ494X1 144 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 SCARA3Q6AZY7 606 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 DNAJC24Q6P3W2 148 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 LCLAT1Q6UWP7 414 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ARCQ7LC44 396 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 CATSPER4Q7RTX7 472 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 GSPT2Q8IYD1 628 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 TSEN2Q8NCE0 465 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 BEST2Q8NFU1 509 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 CCHCR1Q8TD31 782 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 PIK3R5Q8WYR1 880 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 TFAP2BQ92481 460 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ELMO3Q96BJ8 720 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 C18orf8Q96DM3 657 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ZBTB10Q96DT7 871 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 MCRS1Q96EZ8 462 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 CPB2Q96IY4 423 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 BTBD6Q96KE9 485 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 SNX27Q96L92 541 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ZIM3Q96PE6 472 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 RUFY1Q96T51 708 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FMO2Q99518 471 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FOXP3Q9BZS1 431 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 UPF3AQ9H1J1 476 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ERVK-5Q9HDB9 667 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ST7Q9NRC1 585 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 GDAP2Q9NXN4 497 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FLRT1Q9NZU1 646 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 WHRNQ9P202 907 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FAM153AQ9UHL3 310 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 UBQLN1Q9UMX0 589 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 AGAP1Q9UPQ3 857 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 DRG1Q9Y295 367 aaKnown RBP8.06□□□□□ -1.12
COL6A3-208ENST00000468792 FAN1Q9Y2M0 1017 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 NFS1Q9Y697 457 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 CITO14578 2027 aa8.06□□□□□ -1.12
COL6A3-208ENST00000468792 DOCK3Q8IZD9 2030 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 MGAMO43451 1857 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 C17orf102A2RUQ5 167 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SRRM3A6NNA2 597 aaPredicted RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 HMGB1P1B2RPK0 211 aaPredicted RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 O00370 1275 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 PIRO00625 290 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 POLR3GO15318 223 aaPredicted RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 CA12O43570 354 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SHOX2O60902 331 aaPredicted RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 ECEL1O95672 775 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 GAS8O95995 478 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 ALDH1A1P00352 501 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 KRT19P08727 400 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 KRT7P08729 469 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 NUDT17P0C025 328 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 CD58P19256 250 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 PCK1P35558 622 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 HSD17B3P37058 310 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SCNN1AP37088 669 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 RPL34P49207 117 aaKnown RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 OSTNP61366 133 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 MRPS25P82663 173 aaKnown RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SKOR1P84550 965 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 PURAQ00577 322 aaKnown RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 PTK6Q13882 451 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 HLTFQ14527 1009 aaKnown RBP eCLIP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SLMAPQ14BN4 828 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SNX17Q15036 470 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 TRADDQ15628 312 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 FSCN1Q16658 493 aaKnown RBP8.05□□□□□ -1.12
COL6A3-208ENST00000468792 PTPROQ16827 1216 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 KIZQ2M2Z5 673 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 PTPN20Q4JDL3 420 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 SGO2Q562F6 1265 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 ARHGAP17Q68EM7 881 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 TTC27Q6P3X3 843 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 DCUN1D2Q6PH85 259 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 RUFY4Q6ZNE9 571 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 CEP128Q6ZU80 1094 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 DPH6Q7L8W6 267 aa8.05□□□□□ -1.12
COL6A3-208ENST00000468792 TMC3Q7Z5M5 1100 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms