RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ABCB6Q9NP58 842 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
MSH5-214ENST00000468602 POLIQ9UNA4 740 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 NME7Q9Y5B8 376 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 FHOD1Q9Y613 1164 aa12.03□□□□□ -0.48
MSH5-214ENST00000468602 CHD7Q9P2D1 2997 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 FOXN3O00409 490 aaPredicted RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 URODP06132 367 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 CCDC172P0C7W6 258 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 DNAJB1P25685 340 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 ANXA13P27216 316 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 SOX5P35711 763 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 RAD23BP54727 409 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 POLR2FP61218 127 aaKnown RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 GPR17Q13304 367 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 RAB33AQ14088 237 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 STILQ15468 1287 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 INTS6LQ5JSJ4 861 aaKnown RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 TPGS2Q68CL5 300 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 RRAGAQ7L523 313 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 OSTM1Q86WC4 334 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 ZNF677Q86XU0 584 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 RABGGTAQ92696 567 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 KAT5Q92993 513 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 FUBP3Q96I24 572 aaKnown RBP eCLIP12.02□□□□□ -0.49
MSH5-214ENST00000468602 MMS19Q96T76 1030 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 CLSTN3Q9BQT9 956 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 ZNF576Q9H609 170 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 LUC7L2Q9Y383 392 aaKnown RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 MYO9BQ13459 2157 aa12.02□□□□□ -0.49
MSH5-214ENST00000468602 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.49
MSH5-214ENST00000468602 PTPRDP23468 1912 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 GRM6O15303 877 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 CLCN1P35523 988 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 STAT1P42224 750 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 NDUFV1P49821 464 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 NDST1P52848 882 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 CDH8P55286 799 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 ERVFC1P60507 584 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 APBA1Q02410 837 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 LRMPQ12912 555 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 COL19A1Q14993 1142 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 CFAP221Q4G0U5 840 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 LILRA6Q6PI73 481 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 IRF2BP2Q7Z5L9 587 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 CNGA4Q8IV77 575 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 ZNF397Q8NF99 534 aaPredicted RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 OR10T2Q8NGX3 314 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 MYCBPAPQ8TBZ2 947 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 HASPINQ8TF76 798 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 MRPL38Q96DV4 380 aaKnown RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 HNRNPABQ99729 332 aaKnown RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 SYT11Q9BT88 431 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 RHOBTB2Q9BYZ6 727 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 SNX25Q9H3E2 840 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 AJAP1Q9UKB5 411 aaPredicted RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 PCDHGC3Q9UN70 934 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 BZW2Q9Y6E2 419 aaKnown RBP12.01□□□□□ -0.49
MSH5-214ENST00000468602 TRANK1O15050 2925 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
MSH5-214ENST00000468602 MTCL1Q9Y4B5 1905 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 EPOPA6NHQ4 379 aa12□□□□□ -0.49
MSH5-214ENST00000468602 A8MXQ7 604 aa12□□□□□ -0.49
MSH5-214ENST00000468602 I3L4J1 428 aa12□□□□□ -0.49
MSH5-214ENST00000468602 RNF225M0QZC1 329 aaPredicted RBP12□□□□□ -0.49
MSH5-214ENST00000468602 GFPT2O94808 682 aa12□□□□□ -0.49
MSH5-214ENST00000468602 POU2F2P09086 479 aa12□□□□□ -0.49
MSH5-214ENST00000468602 VDRP11473 427 aa12□□□□□ -0.49
MSH5-214ENST00000468602 FERP16591 822 aa12□□□□□ -0.49
MSH5-214ENST00000468602 PTPN1P18031 435 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 LMO2P25791 158 aa12□□□□□ -0.49
MSH5-214ENST00000468602 MAGEA11P43364 429 aa12□□□□□ -0.49
MSH5-214ENST00000468602 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 KCNC3Q14003 757 aa12□□□□□ -0.49
MSH5-214ENST00000468602 CNGA2Q16280 664 aa12□□□□□ -0.49
MSH5-214ENST00000468602 PSMD5Q16401 504 aa12□□□□□ -0.49
MSH5-214ENST00000468602 PTPROQ16827 1216 aa12□□□□□ -0.49
MSH5-214ENST00000468602 PKDCCQ504Y2 493 aa12□□□□□ -0.49
MSH5-214ENST00000468602 KIAA1841Q6NSI8 718 aa12□□□□□ -0.49
MSH5-214ENST00000468602 TMEM270Q6UE05 265 aa12□□□□□ -0.49
MSH5-214ENST00000468602 TMEM184AQ6ZMB5 413 aa12□□□□□ -0.49
MSH5-214ENST00000468602 PPFIBP1Q86W92 1011 aa12□□□□□ -0.49
MSH5-214ENST00000468602 DCP1BQ8IZD4 617 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
MSH5-214ENST00000468602 B3GALNT2Q8NCR0 500 aa12□□□□□ -0.49
MSH5-214ENST00000468602 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms