RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ABCB6Q9NP58 842 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 UBN1Q9NPG3 1134 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 AVENQ9NQS1 362 aaPredicted RBP21.85■■□□□ 1.09
TMEM53-207ENST00000468117 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.85■■□□□ 1.09
TMEM53-207ENST00000468117 O00370 1275 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 KIF4AO95239 1232 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 FGFR1P11362 822 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 C1QBPQ07021 282 aaKnown RBP21.85■■□□□ 1.09
TMEM53-207ENST00000468117 RPS6KA1Q15418 735 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 PPP1R2P3Q6NXS1 205 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 CEP112Q8N8E3 955 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 DIS3LQ8TF46 1054 aaKnown RBP21.85■■□□□ 1.09
TMEM53-207ENST00000468117 LHX5Q9H2C1 402 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 STXBP5LQ9Y2K9 1186 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 TMEM110-MUSTN1A8MSY1 372 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 A8MXQ7 604 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 PODXLO00592 558 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 HUS1O60921 280 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 TADA3O75528 432 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 MICAL2O94851 1124 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 MESDQ14696 234 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 CREG2Q8IUH2 290 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 C3orf58Q8NDZ4 430 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 DBF4BQ8NFT6 615 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 DPEP3Q9H4B8 488 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 CYTH4Q9UIA0 394 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 AMFRQ9UKV5 643 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 M0QYV0 167 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 LMO2P25791 158 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 LBX1P52954 281 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 CNGA2Q16280 664 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 LIN9Q5TKA1 542 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 ANKRD33Q7Z3H0 272 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 LIMS2Q7Z4I7 341 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 UNC93AQ86WB7 457 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 CALR3Q96L12 384 aaKnown RBP21.84■■□□□ 1.09
TMEM53-207ENST00000468117 FTHL17Q9BXU8 183 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 TRIM7Q9C029 511 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 KIAA1257Q9ULG3 409 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 ALG6Q9Y672 507 aa21.84■■□□□ 1.09
TMEM53-207ENST00000468117 CYB561D2O14569 222 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 PDGFRBP09619 1106 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 GNL1P36915 607 aaPredicted RBP21.83■■□□□ 1.09
TMEM53-207ENST00000468117 GRIK3Q13003 919 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 UPP1Q16831 310 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 TRIM60Q495X7 471 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 PLEKHG4Q58EX7 1191 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 C11orf63Q6NUN7 778 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 ERICH1Q86X53 443 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 ADGRF2Q8IZF7 708 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 PDCL2Q8N4E4 241 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 SCLYQ96I15 445 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 LPIN3Q9BQK8 851 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 FAM49BQ9NUQ9 324 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 ANAPC7Q9UJX3 599 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 TSPAN16Q9UKR8 245 aa21.83■■□□□ 1.09
TMEM53-207ENST00000468117 PDE2AO00408 941 aaPredicted RBP21.82■■□□□ 1.08
TMEM53-207ENST00000468117 EOMESO95936 686 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 TLE2Q04725 743 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 FAAP100Q0VG06 881 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 ERCC6LQ2NKX8 1250 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 PPP1R26Q5T8A7 1209 aaPredicted RBP21.82■■□□□ 1.08
TMEM53-207ENST00000468117 TOP6BLQ8N6T0 577 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 UBA3Q8TBC4 463 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 HES6Q96HZ4 224 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 SNX25Q9H3E2 840 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 HIPK3Q9H422 1215 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 EHD2Q9NZN4 543 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 EFCAB8A8MWE9 144 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 KCNK3O14649 394 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 RPL9P32969 192 aaKnown RBP21.82■■□□□ 1.08
TMEM53-207ENST00000468117 FAM189BP81408 668 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 MAMLD1Q13495 774 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 PTPN20Q4JDL3 420 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 ARMC5Q96C12 935 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 PPP1R12CQ9BZL4 782 aa21.82■■□□□ 1.08
TMEM53-207ENST00000468117 CTAGE15A4D2H0 777 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 DCDC2CA8MYV0 355 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 GJB6O95452 261 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CALB1P05937 261 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CTAGE8P0CG41 777 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CCL23P55773 120 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CLLU1OSQ5K130 101 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CYP4A22Q5TCH4 519 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 PLEKHA7Q6IQ23 1121 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 LCLAT1Q6UWP7 414 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CTAGE6Q86UF2 777 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CPNE8Q86YQ8 564 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 CTAGE4Q8IX94 777 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 MS4A14Q96JA4 679 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 SENP8Q96LD8 212 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 SMARCAL1Q9NZC9 954 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 TJP2Q9UDY2 1190 aa21.81■■□□□ 1.08
TMEM53-207ENST00000468117 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.81■■□□□ 1.08
TMEM53-207ENST00000468117 COL6A1P12109 1028 aa21.8■■□□□ 1.08
TMEM53-207ENST00000468117 COMTP21964 271 aa21.8■■□□□ 1.08
TMEM53-207ENST00000468117 GPD2P43304 727 aa21.8■■□□□ 1.08
TMEM53-207ENST00000468117 TUSC3Q13454 348 aa21.8■■□□□ 1.08
TMEM53-207ENST00000468117 PAN2Q504Q3 1202 aaKnown RBP21.8■■□□□ 1.08
TMEM53-207ENST00000468117 WSCD1Q658N2 575 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms