RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PPP2R3CQ969Q6 453 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 MRFAP1L1Q96HT8 127 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 RTP3Q9BQQ7 232 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 NT5C1AQ9BXI3 368 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
SNIP1-202ENST00000468040 STK33Q9BYT3 514 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 PRDM12Q9H4Q4 367 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 CEP72Q9P209 647 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 PCDHB4Q9Y5E5 795 aa16.23■□□□□ 0.19
SNIP1-202ENST00000468040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.23■□□□□ 0.197e-7■■■□□ 19
SNIP1-202ENST00000468040 EPHB6O15197 1021 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 ADH1AP07327 375 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 CNPP09543 421 aaKnown RBP16.22■□□□□ 0.19
SNIP1-202ENST00000468040 ACO1P21399 889 aaKnown RBP16.22■□□□□ 0.19
SNIP1-202ENST00000468040 IRS1P35568 1242 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 ZNF75DP51815 510 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 MAPRE1Q15691 268 aaKnown RBP16.22■□□□□ 0.19
SNIP1-202ENST00000468040 PTPN21Q16825 1174 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 VSTM4Q8IW00 320 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 DCP1BQ8IZD4 617 aaKnown RBP16.22■□□□□ 0.19
SNIP1-202ENST00000468040 UBR7Q8N806 425 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 OR10T2Q8NGX3 314 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 SHC3Q92529 594 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 SPAG5Q96R06 1193 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 SYT15Q9BQS2 421 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 ZCWPW1Q9H0M4 648 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 CDY1Q9Y6F8 540 aa16.22■□□□□ 0.19
SNIP1-202ENST00000468040 HIDE1A8MVS5 230 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 F8VZ95 297 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 TEX28O15482 410 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 PDGFRBP09619 1106 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 KRT5P13647 590 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 CPB1P15086 417 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 RPL17P18621 184 aaKnown RBP16.21■□□□□ 0.19
SNIP1-202ENST00000468040 ACAT1P24752 427 aaKnown RBP16.21■□□□□ 0.19
SNIP1-202ENST00000468040 LMO2P25791 158 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 TRIM14Q14142 442 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 GSE1Q14687 1217 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 DRAP1Q14919 205 aaPredicted RBP16.21■□□□□ 0.19
SNIP1-202ENST00000468040 INTS6LQ5JSJ4 861 aaKnown RBP16.21■□□□□ 0.19
SNIP1-202ENST00000468040 TMEM270Q6UE05 265 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 FMNL3Q8IVF7 1028 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 CRYBG2Q8N1P7 616 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 B3GALNT2Q8NCR0 500 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 TMEM176AQ96HP8 235 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 KLHL5Q96PQ7 755 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 CLSTN3Q9BQT9 956 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 NLRC4Q9NPP4 1024 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 HMGXB4Q9UGU5 601 aa16.21■□□□□ 0.19
SNIP1-202ENST00000468040 AJAP1Q9UKB5 411 aaPredicted RBP16.21■□□□□ 0.19
SNIP1-202ENST00000468040 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 A0A1W2PQJ5 194 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 HCRTO43612 131 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 C1RP00736 705 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 PAEPP09466 180 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 TPM1P09493 284 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 PTPN1P18031 435 aaKnown RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 POU3F3P20264 500 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 KLRC2P26717 231 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 OR1D2P34982 312 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 USP8P40818 1118 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 MRE11P49959 708 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 RAD23BP54727 409 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 ROR1Q01973 937 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 GPR17Q13304 367 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 RAB33AQ14088 237 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 NFE2Q16621 373 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 ZNF394Q53GI3 561 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 RSPO2Q6UXX9 243 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 ACOT1Q86TX2 421 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 TWNKQ96RR1 684 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 GAS2L1Q99501 681 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 CDCA3Q99618 268 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 TTYH3Q9C0H2 523 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 ELOVL4Q9GZR5 314 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 DPEP3Q9H4B8 488 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 NSUN3Q9H649 340 aaKnown RBP16.2■□□□□ 0.18
SNIP1-202ENST00000468040 KIAA1257Q9ULG3 409 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 NME7Q9Y5B8 376 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 PCDHGC5Q9Y5F6 944 aa16.2■□□□□ 0.18
SNIP1-202ENST00000468040 ADAM12O43184 909 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 STAT1P42224 750 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 ZNF132P52740 706 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 ARPP19P56211 112 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 JAM2P57087 298 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 PSMC1P62191 440 aaKnown RBP16.19■□□□□ 0.18
SNIP1-202ENST00000468040 SLC39A12Q504Y0 691 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 TPGS2Q68CL5 300 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 FAM171BQ6P995 826 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 FAM71AQ8IYT1 594 aa16.19■□□□□ 0.18
SNIP1-202ENST00000468040 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms