RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 FAM126AQ9BYI3 521 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-207ENST00000467819 C8orf33Q9H7E9 229 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-207ENST00000467819 RBM12Q9NTZ6 932 aaKnown RBP22.73■■□□□ 1.23
COL9A3-207ENST00000467819 EXOC7Q9UPT5 735 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 TDGF1P13385 188 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 IDEP14735 1019 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 CDC25CP30307 473 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 TFAMQ00059 246 aaKnown RBP22.72■■□□□ 1.23
COL9A3-207ENST00000467819 POU5F1Q01860 360 aaKnown RBP22.72■■□□□ 1.23
COL9A3-207ENST00000467819 PPP2R5DQ14738 602 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 ARHGAP29Q52LW3 1261 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 DGLUCYQ7Z3D6 616 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 SPPL2BQ8TCT7 592 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 C2orf15Q8WU43 125 aaKnown RBP22.72■■□□□ 1.23
COL9A3-207ENST00000467819 SECISBP2LQ93073 1101 aaKnown RBP22.72■■□□□ 1.23
COL9A3-207ENST00000467819 MSANTD3Q96H12 275 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 TASP1Q9H6P5 420 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 IL21Q9HBE4 155 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 GTSE1Q9NYZ3 720 aa22.72■■□□□ 1.23
COL9A3-207ENST00000467819 RALGAPA1Q6GYQ0 2036 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 SPECC1L-ADORA2AF8WAN1 911 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 HAPLN1P10915 354 aaPredicted RBP22.71■■□□□ 1.23
COL9A3-207ENST00000467819 SYT1P21579 422 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 POLR2BP30876 1174 aaKnown RBP22.71■■□□□ 1.23
COL9A3-207ENST00000467819 STAT6P42226 847 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 CASP5P51878 434 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 NRLP54845 237 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 MLLT6P55198 1093 aaPredicted RBP22.71■■□□□ 1.23
COL9A3-207ENST00000467819 SATB1Q01826 763 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 GAS6Q14393 721 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 TXNDC11Q6PKC3 985 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 NT5DC4Q86YG4 428 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 BRSK2Q8IWQ3 736 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 DCP1BQ8IZD4 617 aaKnown RBP22.71■■□□□ 1.23
COL9A3-207ENST00000467819 NOC3LQ8WTT2 800 aaKnown RBP22.71■■□□□ 1.23
COL9A3-207ENST00000467819 PANK2Q9BZ23 570 aa22.71■■□□□ 1.23
COL9A3-207ENST00000467819 SMG9Q9H0W8 520 aaKnown RBP22.71■■□□□ 1.23
COL9A3-207ENST00000467819 ATG2BQ96BY7 2078 aa22.7■■□□□ 1.23
COL9A3-207ENST00000467819 ITGB3P05106 788 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 CTHP32929 405 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 CXCL12P48061 93 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 SMARCB1Q12824 385 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 LRRC32Q14392 662 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 PUM1Q14671 1186 aaKnown RBP eCLIP22.7■■□□□ 1.22
COL9A3-207ENST00000467819 LPAL2Q16609 132 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 C1orf228Q6PIY5 440 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 MAMSTRQ6ZN01 415 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 CCDC73Q6ZRK6 1079 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 SYCP3Q8IZU3 236 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 BPIFB1Q8TDL5 484 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 FAM84AQ96KN4 292 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 FGFBP2Q9BYJ0 223 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 TMLHEQ9NVH6 421 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 OBP2AQ9NY56 170 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 RBAKQ9NYW8 714 aaPredicted RBP22.7■■□□□ 1.22
COL9A3-207ENST00000467819 AGAP1Q9UPQ3 857 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 PCDHB13Q9Y5F0 798 aa22.7■■□□□ 1.22
COL9A3-207ENST00000467819 MYBPHLA2RUH7 354 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 GOLGA8IPA6NC78 632 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 GOLGA8JA6NMD2 632 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 PNPLA4P41247 253 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 TSPY1Q01534 308 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 TNK2Q07912 1038 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 RSPO4Q2I0M5 234 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-207ENST00000467819 WDR44Q5JSH3 913 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 Q6ZS52 159 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 RALGPS2Q86X27 583 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-207ENST00000467819 C1orf127Q8N9H9 656 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 STKLD1Q8NE28 680 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 USP28Q96RU2 1077 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 PI4K2AQ9BTU6 479 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 OLFML3Q9NRN5 406 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 FOXD4L1Q9NU39 408 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 PCDHB5Q9Y5E4 795 aa22.69■■□□□ 1.22
COL9A3-207ENST00000467819 A0A087X0B3 334 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 GARTP22102 1010 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 WEE1P30291 646 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 GPR15P49685 360 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 BFSP1Q12934 665 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 PON2Q15165 354 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 PDCL2Q8N4E4 241 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 SPEM1Q8N4L4 309 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 CBWD1Q9BRT8 395 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 SLC46A2Q9BY10 475 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 PCIF1Q9H4Z3 704 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 PANK4Q9NVE7 773 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 GMEB2Q9UKD1 530 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 RAB23Q9ULC3 237 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 USP18Q9UMW8 372 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 L1RE1Q9UN81 338 aa22.68■■□□□ 1.22
COL9A3-207ENST00000467819 MED19A0JLT2 244 aaPredicted RBP22.67■■□□□ 1.22
COL9A3-207ENST00000467819 PRPF40AO75400 957 aaKnown RBP22.67■■□□□ 1.22
COL9A3-207ENST00000467819 LDHAP00338 332 aaKnown RBP22.67■■□□□ 1.22
COL9A3-207ENST00000467819 PLCB2Q00722 1185 aa22.67■■□□□ 1.22
COL9A3-207ENST00000467819 SDHAF4Q5VUM1 108 aa22.67■■□□□ 1.22
COL9A3-207ENST00000467819 SCARA3Q6AZY7 606 aa22.67■■□□□ 1.22
COL9A3-207ENST00000467819 GPR161Q8N6U8 529 aaKnown RBP22.67■■□□□ 1.22
COL9A3-207ENST00000467819 CELF5Q8N6W0 485 aaKnown RBP22.67■■□□□ 1.22
COL9A3-207ENST00000467819 PDILTQ8N807 584 aa22.67■■□□□ 1.22
COL9A3-207ENST00000467819 CACTINQ8WUQ7 758 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms