RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 FOXQ1Q9C009 403 aa15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 LTB4R2Q9NPC1 389 aa15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 ASAH2Q9NR71 780 aa15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 CGNQ9P2M7 1197 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 AGAP1Q9UPQ3 857 aa15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 MAPK8IP1Q9UQF2 711 aa15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
CCHCR1-211ENST00000467553 LAMTOR5O43504 91 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 EXOC3O60645 756 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 GADD45BO75293 160 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 RHOBTB3O94955 611 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 FGF19O95750 216 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 ITGB3P05106 788 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 KRT19P08727 400 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 TMEM191BP0C7N4 346 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 CEBPBP17676 345 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 POLR2BP30876 1174 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 TAF6P49848 677 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 FAM160A1Q05DH4 1040 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 GPR17Q13304 367 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 UBXN2BQ14CS0 331 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 SNRNP35Q16560 246 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 TANGO2Q6ICL3 276 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 MAMSTRQ6ZN01 415 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 ERMP1Q7Z2K6 904 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 ENGASEQ8NFI3 743 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 SMARCD2Q92925 531 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 MSANTD3Q96H12 275 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 ASB16Q96NS5 453 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 TRMT61BQ9BVS5 477 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 R3HCC1Q9Y3T6 440 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 FRYLO94915 3013 aa15.14■□□□□ 0.01
CCHCR1-211ENST00000467553 CYB561D2O14569 222 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 KIF20AO95235 890 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 TNNC2P02585 160 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 ODC1P11926 461 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 PSMC3P17980 439 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 TNNI1P19237 187 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 ALDH1A3P47895 512 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 EPHB3P54753 998 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 TWF1Q12792 350 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 SMARCB1Q12824 385 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 DUOXA2Q1HG44 320 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 SV2CQ496J9 727 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 SCARA3Q6AZY7 606 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 OVOS1Q6IE37 1185 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 C1orf127Q8N9H9 656 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 CCDC127Q96BQ5 260 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 FAM126AQ9BYI3 521 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 MTMR12Q9C0I1 747 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 DSEQ9UL01 958 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 PCDHGA2Q9Y5H1 932 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
CCHCR1-211ENST00000467553 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 PDXKO00764 312 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 FCARP24071 287 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 RBP5P82980 135 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 KCNB1Q14721 858 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 PPP2R5DQ14738 602 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 FAM78AQ5JUQ0 283 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 RNF19BQ6ZMZ0 732 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 TPRG1Q6ZUI0 275 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 METTL23Q86XA0 190 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 MFSD6LQ8IWD5 586 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 C12orf56Q8IXR9 622 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 OR5B17Q8NGF7 314 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 ERCC4Q92889 916 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 ZNF560Q96MR9 790 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 PLA2G2FQ9BZM2 168 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 KCTD10Q9H3F6 313 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 BRD9Q9H8M2 597 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 SPATA6Q9NWH7 488 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 CEP72Q9P209 647 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 EP300Q09472 2414 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-211ENST00000467553 CALUO43852 315 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 CYP11A1P05108 521 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 OR4Q2P0C623 313 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 WEE1P30291 646 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 PNPLA4P41247 253 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 CCR2P41597 374 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 ID4P47928 161 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 TUFMP49411 452 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 CYP24A1Q07973 514 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 BFSP1Q12934 665 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 PSMD6Q15008 389 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 ITIH5Q86UX2 942 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 MAML2Q8IZL2 1156 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 GPR161Q8N6U8 529 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 ST13P5Q8NFI4 369 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-211ENST00000467553 C2orf15Q8WU43 125 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms