RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ATL2Q8NHH9 583 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
HPS1-208ENST00000467246 BCO2Q9BYV7 579 aa12.1□□□□□ -0.47
HPS1-208ENST00000467246 TLDC2A0PJX2 215 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 SMIM23A6NLE4 172 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 STRNO43815 780 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 GTF2A2P52657 109 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 KAZNQ674X7 775 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
HPS1-208ENST00000467246 AAASQ9NRG9 546 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 GOLGA8SH3BPF8 625 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 ADCY6O43306 1168 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 RIPK2O43353 540 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 RARGP13631 454 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 RFC1P35251 1148 aaPredicted RBP12.09□□□□□ -0.47
HPS1-208ENST00000467246 CHKAP35790 457 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 SEC24CP53992 1094 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 PTK6Q13882 451 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 MFSD7Q6UXD7 560 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
HPS1-208ENST00000467246 SLC4A11Q8NBS3 891 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 SCLT1Q96NL6 688 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 WHRNQ9P202 907 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 MORF4L1Q9UBU8 362 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 SLC12A6Q9UHW9 1150 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 NEU2Q9Y3R4 380 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 CEP83Q9Y592 693 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 PLXNA1Q9UIW2 1896 aa12.09□□□□□ -0.47
HPS1-208ENST00000467246 A6NNZ2 444 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 TSPAN1O60635 241 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 KRT1P04264 644 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 ITIH2P19823 946 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 POLR2BP30876 1174 aaKnown RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 ADCY8P40145 1251 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 YWHAEP62258 255 aaKnown RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 TNFAIP2Q03169 654 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 SLMAPQ14BN4 828 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 CCNG2Q16589 344 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 KIAA0319LQ8IZA0 1049 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 C3orf20Q8ND61 904 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 RAPGEF5Q92565 580 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 SNF8Q96H20 258 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 MAML3Q96JK9 1138 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 PWWP2AQ96N64 755 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 SLITRK1Q96PX8 696 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 PTPN18Q99952 460 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 ELOVL4Q9GZR5 314 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 GAS8O95995 478 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 GCLCP48506 637 aaPredicted RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 ITGA8P53708 1063 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 GRIK4Q16099 956 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 RCOR2Q8IZ40 523 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 JOSD2Q8TAC2 188 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 GRK7Q8WTQ7 553 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 CPXM1Q96SM3 734 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 DDX23Q9BUQ8 820 aaKnown RBP12.08□□□□□ -0.48
HPS1-208ENST00000467246 CXCL16Q9H2A7 254 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 AGAP1Q9UPQ3 857 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 GINS2Q9Y248 185 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 SLC45A1Q9Y2W3 748 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
HPS1-208ENST00000467246 MMP3P08254 477 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 SLCO1A2P46721 670 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 LIG3P49916 1009 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 GRB14Q14449 540 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 PTGISQ16647 500 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 KIZQ2M2Z5 673 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 DUSP28Q4G0W2 176 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 SYDE1Q6ZW31 735 aaPredicted RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 ANKRD23Q86SG2 305 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 EPS8L3Q8TE67 593 aaKnown RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 EPN3Q9H201 632 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 ASB7Q9H672 318 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 SETD4Q9NVD3 440 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 NDUFAB1O14561 156 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 CILPO75339 1184 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 KRT3P12035 628 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 ATF2P15336 505 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 PTPN11Q06124 597 aaPredicted RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 ACVR2BQ13705 512 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 PIGHQ14442 188 aaPredicted RBP12.07□□□□□ -0.48
HPS1-208ENST00000467246 TMEM132DQ14C87 1099 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 DPH6Q7L8W6 267 aa12.07□□□□□ -0.48
HPS1-208ENST00000467246 HOOK3Q86VS8 718 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms