RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 EOGTQ5NDL2 527 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 IL27RAQ6UWB1 636 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 DBX2Q6ZNG2 339 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 ITIH5Q86UX2 942 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 ALLCQ8N6M5 410 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 C3orf58Q8NDZ4 430 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 PSMG2Q969U7 264 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 SLC46A2Q9BY10 475 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 FZD8Q9H461 694 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 KIF9Q9HAQ2 790 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 PPME1Q9Y570 386 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 MSH4O15457 936 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 KLF8O95600 359 aaPredicted RBP13.86□□□□□ -0.19
UBR4-210ENST00000466969 RXRAP19793 462 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 PSMC5P62195 406 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 TARDBPQ13148 414 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBR4-210ENST00000466969 TBC1D25Q3MII6 688 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 HSF5Q4G112 596 aaPredicted RBP13.86□□□□□ -0.19
UBR4-210ENST00000466969 ERICH1Q86X53 443 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
UBR4-210ENST00000466969 NCOA7Q8NI08 942 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 ATP2A3Q93084 1043 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 CXCL16Q9H2A7 254 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 TDP1Q9NUW8 608 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 HSPBP1Q9NZL4 362 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 CCL26Q9Y258 94 aa13.86□□□□□ -0.19
UBR4-210ENST00000466969 FNDC3AQ9Y2H6 1198 aaKnown RBP13.86□□□□□ -0.19
UBR4-210ENST00000466969 A0A1B0GTW7 788 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 SGK1O00141 431 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 NDUFS2O75306 463 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 IFNAR2P48551 515 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 VAC14Q08AM6 782 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 DUSP4Q13115 394 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 EMC2Q15006 297 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 GLRA4Q5JXX5 417 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 FOXJ1Q92949 421 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 PGLYRP2Q96PD5 576 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 LPIN3Q9BQK8 851 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 GOLGA2P5Q9HBQ8 144 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
UBR4-210ENST00000466969 BTBD3Q9Y2F9 522 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 NUB1Q9Y5A7 615 aa13.85□□□□□ -0.19
UBR4-210ENST00000466969 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 DKC1O60832 514 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBR4-210ENST00000466969 CIITAP33076 1130 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 TIE1P35590 1138 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 GRK6P43250 576 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 PCBP4P57723 403 aaKnown RBP13.84□□□□□ -0.19
UBR4-210ENST00000466969 PTH1RQ03431 593 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 TMEM132AQ24JP5 1023 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 IL17RCQ8NAC3 791 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
UBR4-210ENST00000466969 APPL2Q8NEU8 664 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 SLC5A5Q92911 643 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 USP13Q92995 863 aaPredicted RBP13.84□□□□□ -0.19
UBR4-210ENST00000466969 LENG9Q96B70 501 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 ZNF419Q96HQ0 510 aaPredicted RBP13.84□□□□□ -0.19
UBR4-210ENST00000466969 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 MTRQ99707 1265 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 MAN2B2Q9Y2E5 1009 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 BOD1L1Q8NFC6 3051 aa13.84□□□□□ -0.19
UBR4-210ENST00000466969 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 ANTXRLA6NF34 631 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 hCG_1984214I3L0E3 225 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 ZNF217O75362 1048 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 MAOBP27338 520 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 PDE1AP54750 535 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 CLDN6P56747 220 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
UBR4-210ENST00000466969 MTF1Q14872 753 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 TAF12Q16514 161 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 HLA-BQ31612 363 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 ZNF713Q8N859 430 aaPredicted RBP13.83□□□□□ -0.2
UBR4-210ENST00000466969 MAB21L3Q8N8X9 362 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 TTC16Q8NEE8 873 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 BEST2Q8NFU1 509 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 OSCP1Q8WVF1 389 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 GJA10Q969M2 543 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 PSMG3-AS1Q96PY0 264 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 PPP1R10Q96QC0 940 aaKnown RBP13.83□□□□□ -0.2
UBR4-210ENST00000466969 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 CABIN1Q9Y6J0 2220 aa13.83□□□□□ -0.2
UBR4-210ENST00000466969 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
UBR4-210ENST00000466969 ZBTB24O43167 697 aaPredicted RBP13.82□□□□□ -0.2
UBR4-210ENST00000466969 SUV39H1O43463 412 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 CDK4P11802 303 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 POU3F2P20265 443 aaPredicted RBP13.82□□□□□ -0.2
UBR4-210ENST00000466969 NFKB2Q00653 900 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 VEPH1Q14D04 833 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 SNRNP27Q8WVK2 155 aaKnown RBP13.82□□□□□ -0.2
UBR4-210ENST00000466969 ADPGKQ9BRR6 497 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 CRISPLD1Q9H336 500 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 GPRC5CQ9NQ84 441 aa13.82□□□□□ -0.2
UBR4-210ENST00000466969 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms