RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 IRS1P35568 1242 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 CDH8P55286 799 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 TRIM14Q14142 442 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 INTS6LQ5JSJ4 861 aaKnown RBP17.42■□□□□ 0.38
HLA-C-205ENST00000466892 RRAGAQ7L523 313 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 ZNF461Q8TAF7 563 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 HDAC7Q8WUI4 952 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 SHC3Q92529 594 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 MRFAP1L1Q96HT8 127 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 KLHL5Q96PQ7 755 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 ARID3AQ99856 593 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 SYT15Q9BQS2 421 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 STK33Q9BYT3 514 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 TRIM5Q9C035 493 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 GANQ9H2C0 597 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 FAM207AQ9NSI2 230 aaPredicted RBP17.42■□□□□ 0.38
HLA-C-205ENST00000466892 CEP72Q9P209 647 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 DNAJC12Q9UKB3 198 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 CDY1Q9Y6F8 540 aa17.42■□□□□ 0.38
HLA-C-205ENST00000466892 A0A1W2PQJ5 194 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 HIDE1A8MVS5 230 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 RFXAPO00287 272 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 NOL4O94818 638 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 PAEPP09466 180 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 CA8P35219 290 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 NDST1P52848 882 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 SPECC1LQ69YQ0 1117 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 FAM171BQ6P995 826 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 DEFB123Q8N688 67 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 OR10T2Q8NGX3 314 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 FUBP3Q96I24 572 aaKnown RBP eCLIP17.41■□□□□ 0.38
HLA-C-205ENST00000466892 KREMEN1Q96MU8 473 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 ABCB6Q9NP58 842 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.41■□□□□ 0.38
HLA-C-205ENST00000466892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.41■□□□□ 0.38
HLA-C-205ENST00000466892 MTCH2Q9Y6C9 303 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 CHD7Q9P2D1 2997 aa17.41■□□□□ 0.38
HLA-C-205ENST00000466892 GOLGA6L3A6NEY3 463 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 ABLIM3O94929 683 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 CPB1P15086 417 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 ATF2P15336 505 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 CD58P19256 250 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 KLRC2P26717 231 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 OR1D2P34982 312 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 RAP1GAPP47736 663 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 ROR1Q01973 937 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 DUSP6Q16828 381 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 IQCEQ6IPM2 695 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 C4orf50Q6ZRC1 276 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 B3GALNT2Q8NCR0 500 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 MYCBPAPQ8TBZ2 947 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 WHAMMQ8TF30 809 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 AUTS2Q8WXX7 1259 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 TMEM176AQ96HP8 235 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 PKMYT1Q99640 499 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 NUCKS1Q9H1E3 243 aaKnown RBP17.4■□□□□ 0.38
HLA-C-205ENST00000466892 TLE6Q9H808 572 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 AFF4Q9UHB7 1163 aaKnown RBP17.4■□□□□ 0.38
HLA-C-205ENST00000466892 FHOD1Q9Y613 1164 aa17.4■□□□□ 0.38
HLA-C-205ENST00000466892 SCN1AP35498 2009 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 F8VZ95 297 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 GLUD1P00367 558 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 SRGAP2BP0DMP2 458 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 PTPN1P18031 435 aaKnown RBP17.39■□□□□ 0.37
HLA-C-205ENST00000466892 LMO2P25791 158 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 CLCN4P51793 760 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 ZNF132P52740 706 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 BPIFB4P59827 614 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 POLR2FP61218 127 aaKnown RBP17.39■□□□□ 0.37
HLA-C-205ENST00000466892 STILQ15468 1287 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 TMEM270Q6UE05 265 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 RSPO2Q6UXX9 243 aaPredicted RBP17.39■□□□□ 0.37
HLA-C-205ENST00000466892 CACNA2D4Q7Z3S7 1137 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 VSTM4Q8IW00 320 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 FAM71AQ8IYT1 594 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 SPPL2BQ8TCT7 592 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 KAT5Q92993 513 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 SPAG5Q96R06 1193 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
HLA-C-205ENST00000466892 TTYH3Q9C0H2 523 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 PLEKHA4Q9H4M7 779 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 PCDHB4Q9Y5E5 795 aa17.39■□□□□ 0.37
HLA-C-205ENST00000466892 COL4A4P53420 1690 aaPredicted RBP17.39■□□□□ 0.37
HLA-C-205ENST00000466892 WDR27A2RRH5 827 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 CLASP2O75122 1294 aaKnown RBP17.38■□□□□ 0.37
HLA-C-205ENST00000466892 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 CCDC172P0C7W6 258 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 RPL17P18621 184 aaKnown RBP17.38■□□□□ 0.37
HLA-C-205ENST00000466892 KLK7P49862 253 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 RAD23BP54727 409 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 JAM2P57087 298 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 APBA1Q02410 837 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 RAPGEF1Q13905 1077 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 ADGRE1Q14246 886 aa17.38■□□□□ 0.37
HLA-C-205ENST00000466892 DRAP1Q14919 205 aaPredicted RBP17.38■□□□□ 0.37
HLA-C-205ENST00000466892 MEA1Q16626 185 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms