RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SLC10A2Q12908 348 aaPredicted RBP3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 LLGL1Q15334 1064 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 EZH2Q15910 746 aaKnown RBP3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 PROSER3Q2NL68 480 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 TMEM240Q5SV17 173 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 EFCAB2Q5VUJ9 269 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 SLC30A10Q6XR72 485 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 VGLL2Q8N8G2 317 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 C9orf106Q8NAJ2 232 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 C3orf20Q8ND61 904 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 RGMAQ96B86 450 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 FAM136AQ96C01 138 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 TPSD1Q9BZJ3 242 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 WDCPQ9H6R7 721 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 MAN1C1Q9NR34 630 aa3.95□□□□□ -1.78
GTF3C3-209ENST00000466862 SBNO2Q9Y2G9 1366 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 WDR91A4D1P6 747 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 F5H697 171 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 H0YIZ8 118 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 DCLK1O15075 740 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 SLC16A6O15403 523 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 TRIAP1O43715 76 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 ARIH2O95376 493 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 RPLP2P05387 115 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 PDHA1P08559 390 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 EBLN1P0CF75 366 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 NHLRC4P0CG21 123 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 CD6P30203 668 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 ZNF134P52741 427 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 FAM50AQ14320 339 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 PTPN21Q16825 1174 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 ZNF551Q7Z340 670 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 MAVSQ7Z434 540 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 PNMA8AQ86V59 439 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 PPP1R3BQ86XI6 285 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 GNL3LQ9NVN8 582 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 HESX1Q9UBX0 185 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 PADI4Q9UM07 663 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 POLHQ9Y253 713 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 PCDHA3Q9Y5H8 950 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 ZNF804BA4D1E1 1349 aa3.94□□□□□ -1.78
GTF3C3-209ENST00000466862 TARM1B6A8C7 271 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 ALG1L2C9J202 215 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 TP73O15350 636 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 DNAJB5O75953 348 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 NXPH3O95157 252 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 AHSGP02765 367 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 HNRNPCP07910 306 aaKnown RBP eCLIP3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 PIM1P11309 404 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 TYRP14679 529 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 ITGALP20701 1170 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 PHKA1P46020 1223 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 GCLCP48506 637 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 MAP2K6P52564 334 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 EVA1CP58658 441 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 BMPR2Q13873 1038 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 ZNF618Q5T7W0 954 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 TEDDM1Q5T9Z0 273 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 EMC10Q5UCC4 262 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 KIAA1614Q5VZ46 1190 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 SUMO4Q6EEV6 95 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 HEATR3Q7Z4Q2 680 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 TBC1D5Q92609 795 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 SLAMF7Q9NQ25 335 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 ABCF2Q9UG63 623 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 FEZ2Q9UHY8 353 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 WASHC2CQ9Y4E1 1318 aa3.93□□□□□ -1.78
GTF3C3-209ENST00000466862 TISP43B9A030 160 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 M0QYG6 137 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 MYO1FO00160 1098 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 PPM1DO15297 605 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 VPS4BO75351 444 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 PDCP20941 246 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 EIF2B5Q13144 721 aaKnown RBP3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 KLF9Q13886 244 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 TBCCQ15814 346 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 FAM153CQ494X1 144 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 EPHA10Q5JZY3 1008 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 RNF187Q5TA31 235 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 C11orf87Q6NUJ2 197 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 USP45Q70EL2 814 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 NEK8Q86SG6 692 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 USP37Q86T82 979 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 DTX2Q86UW9 622 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 MIER2Q8N344 545 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 ATRIPQ8WXE1 791 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 SLC29A3Q9BZD2 475 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 SEMA4CQ9C0C4 833 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 SIK2Q9H0K1 926 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 NR2E3Q9Y5X4 410 aa3.92□□□□□ -1.78
GTF3C3-209ENST00000466862 CADPSQ9ULU8 1353 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 DTNBO60941 627 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 FTLP02792 175 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 SFPQP23246 707 aaKnown RBP eCLIP3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 EPHB2P29323 1055 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 PPIFP30405 207 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 LIPAP38571 399 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 CLCN2P51788 898 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms