RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CHFRQ96EP1 664 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 AJUBAQ96IF1 538 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 CEP295NLQ96MC4 621 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 ZSWIM3Q96MP5 696 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 GPR20Q99678 358 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 GPATCH1Q9BRR8 931 aaKnown RBP6.21□□□□□ -1.42
LRCH3-212ENST00000466845 CRACR2AQ9BSW2 395 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 HERC2P3Q9BVR0 1158 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 CATSPERZQ9NTU4 200 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 HPF1Q9NWY4 346 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 FNIP2Q9P278 1114 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 STK39Q9UEW8 545 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 SH3BGRL2Q9UJC5 107 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 RIMKLBQ9ULI2 386 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 SRPK3Q9UPE1 567 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 WASF3Q9UPY6 502 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 ATP23Q9Y6H3 246 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 DIP2CQ9Y2E4 1556 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 EVC2Q86UK5 1308 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 ABCA6Q8N139 1617 aa6.21□□□□□ -1.42
LRCH3-212ENST00000466845 SAMD9LQ8IVG5 1584 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 ARPC4-TTLL3A0A0A6YYG9 625 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 H0Y626 953 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 P4HA2O15460 535 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 B4GALT3O60512 393 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 DKC1O60832 514 aaKnown RBP eCLIP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 KNG1P01042 644 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 HSD3B1P14060 373 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 PRLRP16471 622 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 STAT1P42224 750 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 MCM2P49736 904 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 RPS6KA3P51812 740 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 HERVK_113P62684 666 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 GBE1Q04446 702 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 ITKQ08881 620 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 DBPQ10586 325 aaPredicted RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 FAPQ12884 760 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 INAQ16352 499 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 KIAA0753Q2KHM9 967 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 ZXDCQ2QGD7 858 aaPredicted RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 KBTBD12Q3ZCT8 623 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 SLFN13Q68D06 897 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 Q6ZUG5 572 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 LHFPL2Q6ZUX7 228 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 DGLUCYQ7Z3D6 616 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 STRA8Q7Z7C7 330 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 KBTBD2Q8IY47 623 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 AADATQ8N5Z0 425 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 SPATA5Q8NB90 893 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 ERMNQ8TAM6 284 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 HDAC2Q92769 488 aaKnown RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 NINJ1Q92982 152 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 KIF1BPQ96EK5 621 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 EPSTI1Q96J88 318 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 RMDN3Q96TC7 470 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 CHCHD6Q9BRQ6 235 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 VCX3BQ9H321 246 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 SEC61A2Q9H9S3 476 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 KCND1Q9NSA2 647 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 IL20Q9NYY1 176 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 ZNF624Q9P2J8 865 aaPredicted RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 DDX20Q9UHI6 824 aaKnown RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 EIF2B4Q9UI10 523 aaKnown RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 RRP7AQ9Y3A4 280 aaKnown RBP6.2□□□□□ -1.42
LRCH3-212ENST00000466845 PCDHA8Q9Y5H6 950 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 ARHGEF12Q9NZN5 1544 aa6.2□□□□□ -1.42
LRCH3-212ENST00000466845 SUPT6HQ7KZ85 1726 aaKnown RBP6.19□□□□□ -1.42
LRCH3-212ENST00000466845 SIGLEC1Q9BZZ2 1709 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 REREQ9P2R6 1566 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 TRAPPC8Q9Y2L5 1435 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 NPEPPSL1A6NEC2 478 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 GSG1L2A8MUP6 293 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 A8MVJ9 347 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 HNRNPCL2B2RXH8 293 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 H0Y858 1186 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 SLC7A4O43246 635 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 AHCYL1O43865 530 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 HNRNPCL1O60812 293 aaKnown RBP6.19□□□□□ -1.42
LRCH3-212ENST00000466845 ZBED4O75132 1171 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 RTN2O75298 545 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 ERLIN1O75477 346 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 KLHL18O94889 574 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 PTPN1P18031 435 aaKnown RBP6.19□□□□□ -1.42
LRCH3-212ENST00000466845 RDXP35241 583 aaKnown RBP6.19□□□□□ -1.42
LRCH3-212ENST00000466845 ALDH5A1P51649 535 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-212ENST00000466845 IKQ13123 557 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-212ENST00000466845 SCARB2Q14108 478 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 NEDD9Q14511 834 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 PPA1Q15181 289 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 RCN1Q15293 331 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 KRT71Q3SY84 523 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 TRIM61Q5EBN2 209 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 CPZQ66K79 652 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 KAZNQ674X7 775 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 LIN54Q6MZP7 749 aa6.19□□□□□ -1.42
LRCH3-212ENST00000466845 ARMC9Q7Z3E5 817 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms