RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 ECHDC2Q86YB7 292 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 TMEM35BQ8NCS4 154 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 C1orf131Q8NDD1 294 aaKnown RBP10.14□□□□□ -0.79
SRPRB-202ENST00000466636 ZNF564Q8TBZ8 553 aaPredicted RBP10.14□□□□□ -0.79
SRPRB-202ENST00000466636 KBTBD7Q8WVZ9 684 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 VCPIP1Q96JH7 1222 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 C11orf70Q9BRQ4 267 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 NUP85Q9BW27 656 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 ZNF518BQ9C0D4 1074 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 RSAD1Q9HA92 442 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 RGS18Q9NS28 235 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 CHORDC1Q9UHD1 332 aaPredicted RBP10.14□□□□□ -0.79
SRPRB-202ENST00000466636 KIAA1257Q9ULG3 409 aa10.14□□□□□ -0.79
SRPRB-202ENST00000466636 PACSIN2Q9UNF0 486 aaPredicted RBP10.14□□□□□ -0.79
SRPRB-202ENST00000466636 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.14□□□□□ -0.79
SRPRB-202ENST00000466636 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
SRPRB-202ENST00000466636 ANK1P16157 1881 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 RALGAPA2Q2PPJ7 1873 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 TCRBV5S1A1TA0A578 114 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 C9IYK1 514 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 CES2O00748 559 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 GPR37O15354 613 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
SRPRB-202ENST00000466636 MICAL2O94851 1124 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 THP07101 528 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 FGFR1P11362 822 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 IGFBP6P24592 240 aaPredicted RBP10.13□□□□□ -0.79
SRPRB-202ENST00000466636 SCNN1GP51170 649 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 LILRA4P59901 499 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 FAM189BP81408 668 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 BFSP2Q13515 415 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 RPS6KA1Q15418 735 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 CNGA2Q16280 664 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 LIN9Q5TKA1 542 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 PLEKHA7Q6IQ23 1121 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 LLGL2Q6P1M3 1020 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 PEX26Q7Z412 305 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
SRPRB-202ENST00000466636 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 UNC93AQ86WB7 457 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 TOP6BLQ8N6T0 577 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 HES6Q96HZ4 224 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 ZNF333Q96JL9 665 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 CAPZA3Q96KX2 299 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 PSMB7Q99436 277 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 NT5C1AQ9BXI3 368 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 UBN1Q9NPG3 1134 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 ADAM22Q9P0K1 906 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.13□□□□□ -0.79
SRPRB-202ENST00000466636 CYTH4Q9UIA0 394 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 L1RE1Q9UN81 338 aa10.13□□□□□ -0.79
SRPRB-202ENST00000466636 V9GYY5 206 aaPredicted RBP10.13□□□□□ -0.79
SRPRB-202ENST00000466636 CTAGE15A4D2H0 777 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 PODXLO00592 558 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 NBNO60934 754 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CALB1P05937 261 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 FAM163BP0C2L3 166 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CTAGE8P0CG41 777 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 HSPA8P11142 646 aaKnown RBP10.12□□□□□ -0.79
SRPRB-202ENST00000466636 WARSP23381 471 aaKnown RBP10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CXCR5P32302 372 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 RPL9P32969 192 aaKnown RBP10.12□□□□□ -0.79
SRPRB-202ENST00000466636 MAMLD1Q13495 774 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 PTPROQ16827 1216 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 ERCC6LQ2NKX8 1250 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 C2CD6Q53TS8 623 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 SGO2Q562F6 1265 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 ARHGAP17Q68EM7 881 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
SRPRB-202ENST00000466636 LCLAT1Q6UWP7 414 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 DPH6Q7L8W6 267 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 ANKRD33Q7Z3H0 272 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 PHLDB2Q86SQ0 1253 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CTAGE6Q86UF2 777 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 OSTM1Q86WC4 334 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CTAGE4Q8IX94 777 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CRYBG2Q8N1P7 616 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 OR6B3Q8NGW1 331 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 GOLGA1Q92805 767 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 ARMC5Q96C12 935 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 HEXIM2Q96MH2 286 aaKnown RBP10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 ALG6Q9Y672 507 aa10.12□□□□□ -0.79
SRPRB-202ENST00000466636 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 M0QYV0 167 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 HCRTO43612 131 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 PQBP1O60828 265 aaKnown RBP10.11□□□□□ -0.79
SRPRB-202ENST00000466636 EOMESO95936 686 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 PFKMP08237 780 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 COL6A1P12109 1028 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 COMTP21964 271 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 GPD2P43304 727 aa10.11□□□□□ -0.79
SRPRB-202ENST00000466636 AARSP49588 968 aaKnown RBP eCLIP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms