RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 GIPC2Q8TF65 315 aa20.35■□□□□ 0.85
SRSF4-202ENST00000466448 GCNAQ96QF7 691 aa20.35■□□□□ 0.85
SRSF4-202ENST00000466448 IKZF4Q9H2S9 585 aa20.35■□□□□ 0.85
SRSF4-202ENST00000466448 EPG5Q9HCE0 2579 aa20.35■□□□□ 0.85
SRSF4-202ENST00000466448 SLC30A4O14863 429 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 CD2BP2O95400 341 aaKnown RBP20.34■□□□□ 0.85
SRSF4-202ENST00000466448 HOXA6P31267 233 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 ABCD1P33897 745 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 MCM2P49736 904 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 TAF6P49848 677 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 ITPRIPL2Q3MIP1 535 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 WSCD1Q658N2 575 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 PRR23CQ6ZRP0 262 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 TMEM150AQ86TG1 271 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 SYNPOQ8N3V7 929 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 RASSF8Q8NHQ8 419 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 THG1LQ9NWX6 298 aaKnown RBP20.34■□□□□ 0.85
SRSF4-202ENST00000466448 DPP3Q9NY33 737 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 AGO2Q9UKV8 859 aaKnown RBP20.34■□□□□ 0.85
SRSF4-202ENST00000466448 STYXL1Q9Y6J8 313 aa20.34■□□□□ 0.85
SRSF4-202ENST00000466448 EXTL3O43909 919 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 HAPLN1P10915 354 aaPredicted RBP20.33■□□□□ 0.85
SRSF4-202ENST00000466448 LONP1P36776 959 aaKnown RBP20.33■□□□□ 0.85
SRSF4-202ENST00000466448 TAF12Q16514 161 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 SLFN12LQ6IEE8 588 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 EFCAB13Q8IY85 973 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 CMTM8Q8IZV2 173 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 THEM5Q8N1Q8 247 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 FAM160A2Q8N612 972 aaPredicted RBP20.33■□□□□ 0.85
SRSF4-202ENST00000466448 SPPL2BQ8TCT7 592 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 C2orf15Q8WU43 125 aaKnown RBP20.33■□□□□ 0.85
SRSF4-202ENST00000466448 LARP4BQ92615 738 aaKnown RBP20.33■□□□□ 0.85
SRSF4-202ENST00000466448 CCSER1Q9C0I3 900 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 ST6GALNAC4Q9H4F1 302 aa20.33■□□□□ 0.85
SRSF4-202ENST00000466448 ABI2Q9NYB9 513 aaPredicted RBP20.33■□□□□ 0.85
SRSF4-202ENST00000466448 MYH11P35749 1972 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 GDF9O60383 454 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 SMARCB1Q12824 385 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 PKN3Q6P5Z2 889 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 CRELD2Q6UXH1 353 aaPredicted RBP20.32■□□□□ 0.84
SRSF4-202ENST00000466448 CEP68Q76N32 757 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 WDR5BQ86VZ2 330 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 CHFRQ96EP1 664 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 FAM83CQ9BQN1 747 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 GKN1Q9NS71 199 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 CCL26Q9Y258 94 aa20.32■□□□□ 0.84
SRSF4-202ENST00000466448 NUP210Q8TEM1 1887 aaPredicted RBP20.31■□□□□ 0.84
SRSF4-202ENST00000466448 OTOL1A6NHN0 477 aaPredicted RBP20.31■□□□□ 0.84
SRSF4-202ENST00000466448 KPNA7A9QM74 516 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 ADRB1P08588 477 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 HMGA1P17096 107 aaKnown RBP20.31■□□□□ 0.84
SRSF4-202ENST00000466448 ADSSP30520 456 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 PPM1JQ5JR12 505 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 MAB21L3Q8N8X9 362 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 USP13Q92995 863 aaPredicted RBP20.31■□□□□ 0.84
SRSF4-202ENST00000466448 HPS4Q9NQG7 708 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 TMLHEQ9NVH6 421 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 SPTBN2O15020 2390 aa20.31■□□□□ 0.84
SRSF4-202ENST00000466448 BMP15O95972 392 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 F11P03951 625 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 DDIT3P35638 169 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 AVPR1AP37288 418 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 PXNP49023 591 aaPredicted RBP20.3■□□□□ 0.84
SRSF4-202ENST00000466448 NLRP12P59046 1061 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 POU5F1Q01860 360 aaKnown RBP20.3■□□□□ 0.84
SRSF4-202ENST00000466448 PTPAQ15257 358 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 SF3A1Q15459 793 aaKnown RBP20.3■□□□□ 0.84
SRSF4-202ENST00000466448 SV2CQ496J9 727 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 TMEM196Q5HYL7 178 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 TRIM68Q6AZZ1 485 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 FSTL4Q6MZW2 842 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 ZNF720Q7Z2F6 126 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 SFR1Q86XK3 245 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 DCP1BQ8IZD4 617 aaKnown RBP20.3■□□□□ 0.84
SRSF4-202ENST00000466448 KRI1Q8N9T8 703 aaKnown RBP20.3■□□□□ 0.84
SRSF4-202ENST00000466448 STKLD1Q8NE28 680 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 POMGNT1Q8WZA1 660 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 SMC3Q9UQE7 1217 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 PCDHB5Q9Y5E4 795 aa20.3■□□□□ 0.84
SRSF4-202ENST00000466448 KMT2BQ9UMN6 2715 aaPredicted RBP20.3■□□□□ 0.84
SRSF4-202ENST00000466448 GPR15P49685 360 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 WNT7BP56706 349 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 BFSP1Q12934 665 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 RUNX3Q13761 415 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 LARP1BQ659C4 914 aaKnown RBP20.29■□□□□ 0.84
SRSF4-202ENST00000466448 TXNDC8Q6A555 127 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 RIN3Q8TB24 985 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 ZNF560Q96MR9 790 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 PI4K2AQ9BTU6 479 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 EBF3Q9H4W6 596 aa20.29■□□□□ 0.84
SRSF4-202ENST00000466448 FOXD2O60548 495 aaPredicted RBP20.28■□□□□ 0.84
SRSF4-202ENST00000466448 PPP1R37O75864 691 aa20.28■□□□□ 0.84
SRSF4-202ENST00000466448 KRT37O76014 449 aa20.28■□□□□ 0.84
SRSF4-202ENST00000466448 IL18RAPO95256 599 aa20.28■□□□□ 0.84
SRSF4-202ENST00000466448 DDX6P26196 483 aaKnown RBP eCLIP20.28■□□□□ 0.846e-12■□□□□ 8
SRSF4-202ENST00000466448 KCNA1Q09470 495 aa20.28■□□□□ 0.84
SRSF4-202ENST00000466448 GRSF1Q12849 480 aaKnown RBP eCLIP20.28■□□□□ 0.84
SRSF4-202ENST00000466448 USP49Q70CQ1 688 aa20.28■□□□□ 0.84
SRSF4-202ENST00000466448 DYMQ7RTS9 669 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms