RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 MTFR1Q15390 333 aa20.43■□□□□ 0.86
LIMS2-212ENST00000466410 TFDP3Q5H9I0 405 aa20.43■□□□□ 0.86
LIMS2-212ENST00000466410 CEP128Q6ZU80 1094 aa20.43■□□□□ 0.86
LIMS2-212ENST00000466410 WDR49Q8IV35 697 aa20.43■□□□□ 0.86
LIMS2-212ENST00000466410 TMEM35BQ8NCS4 154 aa20.43■□□□□ 0.86
LIMS2-212ENST00000466410 PRPF31Q8WWY3 499 aaKnown RBP20.43■□□□□ 0.86
LIMS2-212ENST00000466410 NCAPGQ9BPX3 1015 aa20.43■□□□□ 0.86
LIMS2-212ENST00000466410 LSM8O95777 96 aaKnown RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 NQO1P15559 274 aaKnown RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 UBA1P22314 1058 aaKnown RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 MAP2K2P36507 400 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 CDKN2BP42772 138 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 PKN2Q16513 984 aaKnown RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 PPP1R15BQ5SWA1 713 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 GBP7Q8N8V2 638 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 DRG1Q9Y295 367 aaKnown RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 IGF2BP3O00425 579 aaKnown RBP eCLIP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 IFNB1P01574 187 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 RFC5P40937 340 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 IL9RQ01113 521 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 PLCB3Q01970 1234 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 CCDC142Q17RM4 750 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 RNASEH2BQ5TBB1 312 aaKnown RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 SCARA5Q6ZMJ2 495 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 VPS37BQ9H9H4 285 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
LIMS2-212ENST00000466410 SAE1Q9UBE0 346 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-212ENST00000466410 MSCO60682 206 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 MORF4L2Q15014 288 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ZPBP2Q6X784 338 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ZBED8Q8IZ13 594 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 KIF2BQ8N4N8 673 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 TBC1D31Q96DN5 1066 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 MRRFQ96E11 262 aaKnown RBP20.41■□□□□ 0.86
LIMS2-212ENST00000466410 TTC25Q96NG3 672 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ADAM33Q9BZ11 813 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 PITPNM3Q9BZ71 974 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 NIF3L1Q9GZT8 377 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 HOXC10Q9NYD6 342 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 SGK1O00141 431 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 BANF1O75531 89 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 FARP2O94887 1054 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ASMTLO95671 621 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 PIGHQ14442 188 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ERICH1Q86X53 443 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ANKLE1Q8NAG6 615 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 NKD2Q969F2 451 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-212ENST00000466410 PLCD4Q9BRC7 762 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 KLHL14Q9P2G3 628 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 GOLGA8SH3BPF8 625 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 GOLGA8MH3BSY2 632 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 TOM1L1O75674 476 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 SLC8A1P32418 973 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ALDH5A1P51649 535 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ZNF268Q14587 947 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ECHDC2Q86YB7 292 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 TDRPQ86YL5 185 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 DNERQ8NFT8 737 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 SPOCK2Q92563 424 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 KLHL29Q96CT2 875 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 TRABDQ9H4I3 376 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 C10orf88Q9H8K7 445 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 NRBP2Q9NSY0 501 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 TRIM33Q9UPN9 1127 aa20.41■□□□□ 0.86
LIMS2-212ENST00000466410 ALOX15BO15296 676 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 PTPN7P35236 360 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 STAT5BP51692 787 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 AP3M2P53677 418 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 RIPK1Q13546 671 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 C4orf33Q8N1A6 199 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 DENND1AQ8TEH3 1009 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 TJP2Q9UDY2 1190 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 ITGAVP06756 1048 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 SRGAP2CP0DJJ0 459 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 KRT15P19012 456 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 RFC1P35251 1148 aaPredicted RBP20.4■□□□□ 0.86
LIMS2-212ENST00000466410 DYNLT1P63172 113 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 GAD2Q05329 585 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 PDIA2Q13087 525 aaKnown RBP20.4■□□□□ 0.86
LIMS2-212ENST00000466410 DNAJC3Q13217 504 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 DUOXA2Q1HG44 320 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 SMTNL2Q2TAL5 461 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 RNF43Q68DV7 783 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 PRCCQ92733 491 aaPredicted RBP20.4■□□□□ 0.86
LIMS2-212ENST00000466410 THOC1Q96FV9 657 aaKnown RBP20.4■□□□□ 0.86
LIMS2-212ENST00000466410 MRPL4Q9BYD3 311 aaKnown RBP20.4■□□□□ 0.86
LIMS2-212ENST00000466410 MCM8Q9UJA3 840 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 GRID1Q9ULK0 1009 aa20.4■□□□□ 0.86
LIMS2-212ENST00000466410 C3orf70A6NLC5 250 aaPredicted RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 MAFO75444 373 aaPredicted RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 TFAMQ00059 246 aaKnown RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 NR1H3Q13133 447 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 SGSM1Q2NKQ1 1148 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 ANGEL2Q5VTE6 544 aaKnown RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 NIPA2Q8N8Q9 360 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 SLC35B2Q8TB61 432 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 ACO2Q99798 780 aaKnown RBP20.39■□□□□ 0.85
LIMS2-212ENST00000466410 ZNF518BQ9C0D4 1074 aa20.39■□□□□ 0.85
LIMS2-212ENST00000466410 PCDH9Q9HC56 1237 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms