RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 COILP38432 576 aaPredicted RBP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 SREBF2Q12772 1141 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 DHX34Q14147 1143 aaKnown RBP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 DUPD1Q68J44 220 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 C7orf31Q8N865 590 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 UBA3Q8TBC4 463 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 ATG4AQ8WYN0 398 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PIK3R5Q8WYR1 880 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 SEC14L1Q92503 715 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 ACSF2Q96CM8 615 aaPredicted RBP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 FAM118BQ9BPY3 351 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 ERP44Q9BS26 406 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 RAB17Q9H0T7 212 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 CYP3A43Q9HB55 503 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 RALGAPA2Q2PPJ7 1873 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 M0QYV0 167 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PIK3R2O00459 728 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 FSCN2O14926 492 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PGK1P00558 417 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 ERBB2P04626 1255 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 RALAP11233 206 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 YARSP54577 528 aaKnown RBP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 TRIM32Q13049 653 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PPP2R5EQ16537 467 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 GLIPR1L2Q4G1C9 344 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PPP1R15BQ5SWA1 713 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 CCDC105Q8IYK2 499 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 JOSD2Q8TAC2 188 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 TRIB2Q92519 343 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 MRPL45Q9BRJ2 306 aaKnown RBP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 CHST7Q9NS84 486 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.35□□□□□ -0.11
UBE4B-206ENST00000466379 ADAM21Q9UKJ8 722 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PSTPIP1O43586 416 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 CYP3A5P20815 502 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 PSMC4P43686 418 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 PSMC1P62191 440 aaKnown RBP14.34□□□□□ -0.11
UBE4B-206ENST00000466379 CYP1B1Q16678 543 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 SGO2Q562F6 1265 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 CFAP58Q5T655 872 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 TXNRD3NBQ6F5E7 133 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 CD302Q8IX05 232 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 MREGQ8N565 214 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 PLVAPQ9BX97 442 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 LHX5Q9H2C1 402 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 FAM204AQ9H8W3 233 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 PCYOX1Q9UHG3 505 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
UBE4B-206ENST00000466379 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE4B-206ENST00000466379 R3HDM2Q9Y2K5 976 aaKnown RBP14.34□□□□□ -0.11
UBE4B-206ENST00000466379 Q9Y3F1 56 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 SNX9Q9Y5X1 595 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 RFC1P35251 1148 aaPredicted RBP14.34□□□□□ -0.11
UBE4B-206ENST00000466379 HSPA9P38646 679 aaKnown RBP14.34□□□□□ -0.11
UBE4B-206ENST00000466379 GNASQ5JWF2 1037 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 UBXN11Q5T124 520 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 ZFYVE27Q5T4F4 411 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 SESTD1Q86VW0 696 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 NT5DC4Q86YG4 428 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 C3orf20Q8ND61 904 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 RUFY1Q96T51 708 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 SYNCQ9H7C4 482 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 PLEKHA5Q9HAU0 1116 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 PARP2Q9UGN5 583 aa14.34□□□□□ -0.11
UBE4B-206ENST00000466379 HCRTO43612 131 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 KRT14P02533 472 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
UBE4B-206ENST00000466379 MAN1A1P33908 653 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 HSD17B3P37058 310 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 RPL21P46778 160 aaKnown RBP14.33□□□□□ -0.12
UBE4B-206ENST00000466379 CAP1Q01518 475 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 INCA1Q0VD86 236 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 ZBTB6Q15916 424 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 UAP1Q16222 522 aaPredicted RBP14.33□□□□□ -0.12
UBE4B-206ENST00000466379 ALS2CLQ60I27 953 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 CYP4F22Q6NT55 531 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 APBB1IPQ7Z5R6 666 aaPredicted RBP14.33□□□□□ -0.12
UBE4B-206ENST00000466379 IQCKQ8N0W5 287 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 EMC1Q8N766 993 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 EIF1ADQ8N9N8 165 aaKnown RBP14.33□□□□□ -0.12
UBE4B-206ENST00000466379 ARL8AQ96BM9 186 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 FAXDC2Q96IV6 333 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 LPIN3Q9BQK8 851 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 GOLGA2P5Q9HBQ8 144 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 METTL5Q9NRN9 209 aaKnown RBP14.33□□□□□ -0.12
UBE4B-206ENST00000466379 RASAL2Q9UJF2 1139 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 NME7Q9Y5B8 376 aa14.33□□□□□ -0.12
UBE4B-206ENST00000466379 CA12O43570 354 aa14.32□□□□□ -0.12
UBE4B-206ENST00000466379 DUSP11O75319 330 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms