RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DENND4CQ5VZ89 1909 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 A0A1W2PRU2 124 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 HUS1O60921 280 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 TNNC2P02585 160 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 DLATP10515 647 aaKnown RBP23.41■■□□□ 1.34
LIME1-203ENST00000465591 SOWAHAQ2M3V2 549 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 MGAT5BQ3V5L5 792 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 STXBP5Q5T5C0 1151 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 GAREM2Q75VX8 874 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 TRAPPC11Q7Z392 1133 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 LEMD2Q8NC56 503 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 ZNF516Q92618 1163 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 PSMG2Q969U7 264 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 CCDC127Q96BQ5 260 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 HPDLQ96IR7 371 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 PKMYT1Q99640 499 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 CGRRF1Q99675 332 aa23.41■■□□□ 1.34
LIME1-203ENST00000465591 DDX43Q9NXZ2 648 aaKnown RBP23.41■■□□□ 1.34
LIME1-203ENST00000465591 ABI2Q9NYB9 513 aaPredicted RBP23.41■■□□□ 1.34
LIME1-203ENST00000465591 F5P12259 2224 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 A0A1W2PQ27 194 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 A0A1W2PQ64 194 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 A0A1W2PQD8 194 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 CST3P01034 146 aaPredicted RBP23.4■■□□□ 1.34
LIME1-203ENST00000465591 HAPLN1P10915 354 aaPredicted RBP23.4■■□□□ 1.34
LIME1-203ENST00000465591 SNW1Q13573 536 aaKnown RBP23.4■■□□□ 1.34
LIME1-203ENST00000465591 LIMS2Q7Z4I7 341 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 ELSPBP1Q96BH3 223 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 KCTD10Q9H3F6 313 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 FAM86C1Q9NVL1 165 aa23.4■■□□□ 1.34
LIME1-203ENST00000465591 MIA3Q5JRA6 1907 aa23.39■■□□□ 1.34
LIME1-203ENST00000465591 COL4A2P08572 1712 aa23.39■■□□□ 1.34
LIME1-203ENST00000465591 OBSL1O75147 1896 aa23.39■■□□□ 1.34
LIME1-203ENST00000465591 H0Y858 1186 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 GABRDO14764 452 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 RPN1P04843 607 aaKnown RBP23.39■■□□□ 1.33
LIME1-203ENST00000465591 VIPR2P41587 438 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 TUFMP49411 452 aaKnown RBP23.39■■□□□ 1.33
LIME1-203ENST00000465591 CASP4P49662 377 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 GPR15P49685 360 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 NUBP1P53384 320 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 GRM2Q14416 872 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 BECN1Q14457 450 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 DCP1BQ8IZD4 617 aaKnown RBP23.39■■□□□ 1.33
LIME1-203ENST00000465591 ADGRF2Q8IZF7 708 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 TMEM86AQ8N2M4 240 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 TOP6BLQ8N6T0 577 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 STKLD1Q8NE28 680 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 ZSCAN18Q8TBC5 510 aaPredicted RBP23.39■■□□□ 1.33
LIME1-203ENST00000465591 SPPL2BQ8TCT7 592 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 GIPC2Q8TF65 315 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 KBTBD7Q8WVZ9 684 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 SMARCD2Q92925 531 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 MKNK1Q9BUB5 465 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 FOXQ1Q9C009 403 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 CGNQ9P2M7 1197 aaKnown RBP23.39■■□□□ 1.33
LIME1-203ENST00000465591 ASB3Q9Y575 518 aa23.39■■□□□ 1.33
LIME1-203ENST00000465591 TICRRQ7Z2Z1 1910 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 STK25O00506 426 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 EXOC3O60645 756 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 TNNI1P19237 187 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 TSPY1Q01534 308 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 SMARCB1Q12824 385 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 DPYDQ12882 1025 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 PSMD2Q13200 908 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 INTS6LQ5JSJ4 861 aaKnown RBP23.38■■□□□ 1.33
LIME1-203ENST00000465591 PHLDB3Q6NSJ2 640 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 KRBA2Q6ZNG9 492 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 C2orf15Q8WU43 125 aaKnown RBP23.38■■□□□ 1.33
LIME1-203ENST00000465591 RSPRY1Q96DX4 576 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 ACBD6Q9BR61 282 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 PI4K2AQ9BTU6 479 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 IL21Q9HBE4 155 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 ZFP14Q9HCL3 533 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 DMAC2Q9NW81 257 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 PCDHB5Q9Y5E4 795 aa23.38■■□□□ 1.33
LIME1-203ENST00000465591 NUP210Q8TEM1 1887 aaPredicted RBP23.38■■□□□ 1.33
LIME1-203ENST00000465591 CACNA1IQ9P0X4 2223 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 PTPRDP23468 1912 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 MYL1P05976 194 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 GABRR2P28476 465 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 STARD6P59095 220 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 MYO1EQ12965 1108 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 MLF2Q15773 248 aaPredicted RBP23.37■■□□□ 1.33
LIME1-203ENST00000465591 SLC44A4Q53GD3 710 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 SDHAF4Q5VUM1 108 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 VITQ6UXI7 678 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 ALYREFQ86V81 257 aaKnown RBP23.37■■□□□ 1.33
LIME1-203ENST00000465591 GPIHBP1Q8IV16 184 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 CCDC105Q8IYK2 499 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 FAM200AQ8TCP9 573 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 FNBP1Q96RU3 617 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 GTF3C4Q9UKN8 822 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 NME7Q9Y5B8 376 aa23.37■■□□□ 1.33
LIME1-203ENST00000465591 MYBPHLA2RUH7 354 aa23.36■■□□□ 1.33
LIME1-203ENST00000465591 ATP2C2O75185 946 aa23.36■■□□□ 1.33
LIME1-203ENST00000465591 LRRN2O75325 713 aa23.36■■□□□ 1.33
LIME1-203ENST00000465591 ZNF202O95125 648 aa23.36■■□□□ 1.33
LIME1-203ENST00000465591 LMO2P25791 158 aa23.36■■□□□ 1.33
LIME1-203ENST00000465591 MYL7Q01449 175 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms