RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 PLXNA4Q9HCM2 1894 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 THAP12O43422 761 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 ARHGEF15O94989 841 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 MMEP08473 750 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 CFHP08603 1231 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 GNA15P30679 374 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 PDE6CP51160 858 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 TMTC1Q8IUR5 882 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SLC39A11Q8N1S5 342 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 CCDC112Q8NEF3 446 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 HEXIM2Q96MH2 286 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 NT5C1AQ9BXI3 368 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SPTLC3Q9NUV7 552 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SEPT11Q9NVA2 429 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 DDX43Q9NXZ2 648 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SPG21Q9NZD8 308 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.53
PTPRU-206ENST00000465525 TRAPPC3O43617 180 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 CCDC172P0C7W6 258 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 CHRNB2P17787 502 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 PPM1AP35813 382 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 BMPR1AP36894 532 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 CDK17Q00537 523 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 KIAA0319Q5VV43 1072 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 OVOS1Q6IE37 1185 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 METTL23Q86XA0 190 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 C12orf29Q8N999 325 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 OLIG1Q8TAK6 271 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 SAMD11Q96NU1 681 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 AGPAT1Q99943 283 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 RTP3Q9BQQ7 232 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 DEF6Q9H4E7 631 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 FAM49BQ9NUQ9 324 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 PYCARDQ9ULZ3 195 aa18.33■□□□□ 0.52
PTPRU-206ENST00000465525 GABRDO14764 452 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 CYP11A1P05108 521 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 FMNL3Q8IVF7 1028 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 TMEM86AQ8N2M4 240 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 LNX1Q8TBB1 728 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-206ENST00000465525 DDX1Q92499 740 aaKnown RBP18.32■□□□□ 0.52
PTPRU-206ENST00000465525 CCDC42Q96M95 316 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 TGS1Q96RS0 853 aaKnown RBP18.32■□□□□ 0.52
PTPRU-206ENST00000465525 DESI2Q9BSY9 194 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 SYT11Q9BT88 431 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 PLVAPQ9BX97 442 aa18.32■□□□□ 0.52
PTPRU-206ENST00000465525 MYH10P35580 1976 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 BPIFB4P59827 614 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TAP1Q03518 808 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 GFPT1Q06210 699 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TOGARAM2Q6ZUX3 1019 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 UNC93AQ86WB7 457 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 DNAAF5Q86Y56 855 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 PALB2Q86YC2 1186 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 PASD1Q8IV76 773 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TTC39CQ8N584 583 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TMEM169Q96HH4 297 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TMEM209Q96SK2 561 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 NKX2-4Q9H2Z4 354 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 SLC28A3Q9HAS3 691 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 ADAMTS1Q9UHI8 967 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 DSEQ9UL01 958 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 BZW2Q9Y6E2 419 aaKnown RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 A0A087X0T9 212 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 DDX3XO00571 662 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 NRDCO43847 1150 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 AKR1B10O60218 316 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 RB1P06400 928 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 PAEPP09466 180 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 FAM228BP0C875 321 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TYMPP19971 482 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 TNFAIP3P21580 790 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 DNAJB2P25686 324 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 CTNNB1P35222 781 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 LHX1P48742 406 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 KIF11P52732 1056 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 ERVK-21P61565 698 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 FMO1Q01740 532 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 CDR2Q01850 454 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 KRT17Q04695 432 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 YWHAHQ04917 246 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 ELAVL2Q12926 359 aaKnown RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 RTP2Q5QGT7 225 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 VARS2Q5ST30 1063 aaKnown RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 PRSS55Q6UWB4 352 aaPredicted RBP18.31■□□□□ 0.52
PTPRU-206ENST00000465525 OR10T2Q8NGX3 314 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 ZNF606Q8WXB4 792 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 PCDHB18PQ96TA0 734 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 SYT15Q9BQS2 421 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 STK39Q9UEW8 545 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 MTUS1Q9ULD2 1270 aa18.31■□□□□ 0.52
PTPRU-206ENST00000465525 C5orf67F2Z3F1 127 aa18.3■□□□□ 0.52
PTPRU-206ENST00000465525 C2CD2LO14523 706 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms