RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CDT1Q9H211 546 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 PTPRHQ9HD43 1115 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 DNM3Q9UQ16 869 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 PCDHB6Q9Y5E3 794 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 PCDH15Q96QU1 1955 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 PHLPP2Q6ZVD8 1323 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 PTPN13Q12923 2485 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 PP2D1A8MPX8 630 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 HIP1RO75146 1068 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 EGFP01133 1207 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 ENGP17813 658 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 BCKDHBP21953 392 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 U2AF2P26368 475 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP39-212ENST00000465514 DHPSP49366 369 aaPredicted RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 DGKEP52429 567 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 ITPRIPL2Q3MIP1 535 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 ZNF568Q3ZCX4 644 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 XKR4Q5GH76 650 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 TAS1R3Q7RTX0 852 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 ARID3BQ8IVW6 561 aaPredicted RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 DAW1Q8N136 415 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 ZMAT2Q96NC0 199 aaKnown RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 UBL7Q96S82 380 aaPredicted RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 TCHPQ9BT92 498 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 RUSC1Q9BVN2 902 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 TARS2Q9BW92 718 aaKnown RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 MRPL4Q9BYD3 311 aaKnown RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 RAB34Q9BZG1 259 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 TPSD1Q9BZJ3 242 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 TMEM134Q9H6X4 195 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 KMT5AQ9NQR1 393 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 EBF1Q9UH73 591 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 EVLQ9UI08 416 aaPredicted RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 STK24Q9Y6E0 443 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 GOLGA4Q13439 2230 aaKnown RBP10.61□□□□□ -0.71
USP39-212ENST00000465514 ATMQ13315 3056 aa10.61□□□□□ -0.71
USP39-212ENST00000465514 OBSL1O75147 1896 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 SFI1A8K8P3 1242 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 UPK3BL1B0FP48 263 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 UPK3BL2E5RIL1 263 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 PODXLO00592 558 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 DPYSL4O14531 572 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 PRAMEF12O95522 483 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 MCF2P10911 925 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 CDC25AP30304 524 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 MAPK7Q13164 816 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 DMP1Q13316 513 aaPredicted RBP10.6□□□□□ -0.71
USP39-212ENST00000465514 IL17AQ16552 155 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 KRT79Q5XKE5 535 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 RINT1Q6NUQ1 792 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 C1orf186Q6ZWK4 172 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 KCNK18Q7Z418 384 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 C18orf25Q96B23 403 aaPredicted RBP10.6□□□□□ -0.71
USP39-212ENST00000465514 CHFRQ96EP1 664 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 ACAP3Q96P50 834 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 NUSAP1Q9BXS6 441 aaKnown RBP10.6□□□□□ -0.71
USP39-212ENST00000465514 SLC38A7Q9NVC3 462 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 ARHGAP28Q9P2N2 729 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
USP39-212ENST00000465514 RAI2Q9Y5P3 530 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 PIEZO2Q9H5I5 2752 aa10.6□□□□□ -0.71
USP39-212ENST00000465514 LAD1O00515 517 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 ABLIM1O14639 778 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 SLC16A4O15374 487 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 KCNE1P15382 129 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 PROZP22891 400 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 RPL9P32969 192 aaKnown RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 DMC1Q14565 340 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 USP39Q53GS9 565 aaKnown RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 TPGS2Q68CL5 300 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 MPZL3Q6UWV2 235 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 CCNI2Q6ZMN8 369 aaPredicted RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 DTHD1Q6ZMT9 781 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 SYT13Q7L8C5 426 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 C11orf74Q86VG3 221 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 HDDC3Q8N4P3 179 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 KIF2CQ99661 725 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 MMTAG2Q9BU76 263 aaKnown RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 LRRC3Q9BY71 257 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 C17orf75Q9HAS0 396 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 FSCN3Q9NQT6 498 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 MBD1Q9UIS9 605 aaPredicted RBP10.59□□□□□ -0.71
USP39-212ENST00000465514 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 YIPF1Q9Y548 306 aa10.59□□□□□ -0.71
USP39-212ENST00000465514 ATXN2Q99700 1313 aaKnown RBP10.58□□□□□ -0.71
USP39-212ENST00000465514 HELZP42694 1942 aaKnown RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
USP39-212ENST00000465514 MUC22E2RYF6 1773 aaPredicted RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 OTOL1A6NHN0 477 aaPredicted RBP10.58□□□□□ -0.72
USP39-212ENST00000465514 H7C4K7 107 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms