RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 SLKQ9H2G2 1235 aaPredicted RBP3.83□□□□□ -1.8
SNX4-202ENST00000465505 MANSC1Q9H8J5 431 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 ASB6Q9NWX5 421 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 HOXC10Q9NYD6 342 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 UTP6Q9NYH9 597 aaKnown RBP3.83□□□□□ -1.8
SNX4-202ENST00000465505 CLIC5Q9NZA1 410 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 POLG2Q9UHN1 485 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 SLC45A1Q9Y2W3 748 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 GPR45Q9Y5Y3 372 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 IL16Q14005 1332 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 KIF16BQ96L93 1317 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 TRGV11A0A075B6L2 103 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 A0A1W2PS29 197 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 CGB1A6NKQ9 187 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 TRIM64CA6NLI5 447 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 K7ESF4 209 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 YY2O15391 372 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 KIF5CO60282 957 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 LETM1O95202 739 aaPredicted RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 RPN1P04843 607 aaKnown RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 CCDC172P0C7W6 258 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 GATA3P23771 443 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 GNALP38405 381 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 WASP42768 502 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 TERF1P54274 439 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 CTXN1P60606 82 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 HMGN5P82970 282 aaKnown RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 TMED1Q13445 227 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 LONRF1Q17RB8 773 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 AMOTQ4VCS5 1084 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 CCDC93Q567U6 631 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 CT47A1Q5JQC4 288 aaPredicted RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 DNTTIP2Q5QJE6 756 aaKnown RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 SH2D3CQ8N5H7 860 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 CCDC89Q8N998 374 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 COG1Q8WTW3 980 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 NRG4Q8WWG1 115 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 JDP2Q8WYK2 163 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 ZBTB10Q96DT7 871 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 HEPHQ9BQS7 1158 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 GTPBP4Q9BZE4 634 aaKnown RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 C11orf54Q9H0W9 315 aaPredicted RBP3.82□□□□□ -1.8
SNX4-202ENST00000465505 TSPY26PQ9H489 355 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 INTUQ9ULD6 942 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 MAFFQ9ULX9 164 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 PAXBP1Q9Y5B6 917 aa3.82□□□□□ -1.8
SNX4-202ENST00000465505 PRAMEF33A0A0G2JMD5 474 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 TMEM110-MUSTN1A8MSY1 372 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PES1O00541 588 aaKnown RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 MPPED1O15442 326 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PROM1O43490 865 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PRAMEF10O60809 474 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 RNASEH2AO75792 299 aaKnown RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 BBOX1O75936 387 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 SBK3P0C264 359 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 NBPF7P0C2Y1 421 aaPredicted RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 SKILP12757 684 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 CPEP16870 476 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 WT1P19544 449 aaPredicted RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 ABCD1P33897 745 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 MAGEA8P43361 318 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PROK1P58294 105 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 AMPD3Q01432 767 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 CREMQ03060 361 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 KAZNQ674X7 775 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 CCDC70Q6NSX1 233 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 KRT26Q7Z3Y9 468 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 SPATS2Q86XZ4 545 aaKnown RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 HSCBQ8IWL3 235 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 BRSK2Q8IWQ3 736 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 RHOT1Q8IXI2 618 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 CHCHD4Q8N4Q1 142 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PPM1NQ8N819 430 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 TEX19Q8NA77 164 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 CCDC191Q8NCU4 936 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 UROC1Q96N76 676 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 LZTS2Q9BRK4 669 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 TLR10Q9BXR5 811 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 TEX13AQ9BXU3 409 aaPredicted RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 TSPYL1Q9H0U9 437 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 INTS13Q9NVM9 706 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 CHCHD3Q9NX63 227 aaKnown RBP3.81□□□□□ -1.8
SNX4-202ENST00000465505 TMCC3Q9ULS5 477 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PRKAB1Q9Y478 270 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 ENTPD2Q9Y5L3 495 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 SCRIBQ14160 1630 aa3.81□□□□□ -1.8
SNX4-202ENST00000465505 PHLDB1Q86UU1 1377 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 CCDC151A5D8V7 595 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 DNAJC9-AS1A6NH13 148 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 TRIM75PA6NK02 468 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 MPHOSPH10O00566 681 aaKnown RBP3.8□□□□□ -1.8
SNX4-202ENST00000465505 TBX3O15119 743 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 TCEA3O75764 348 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 HAUS5O94927 633 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 AGFG2O95081 481 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 TPM2P07951 284 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 ELFN1P0C7U0 828 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 ZNF853P0CG23 659 aa3.8□□□□□ -1.8
SNX4-202ENST00000465505 POU3F3P20264 500 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms