RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 IL9RQ01113 521 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 OGDHQ02218 1023 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 MXD4Q14582 209 aaPredicted RBP19.33■□□□□ 0.68
SYNE4-204ENST00000465425 CYP4A22Q5TCH4 519 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 EEPD1Q7L9B9 569 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 DEFB132Q7Z7B7 95 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 TCP11Q8WWU5 503 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 GGA3Q9NZ52 723 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 RGS17Q9UGC6 210 aaPredicted RBP19.33■□□□□ 0.68
SYNE4-204ENST00000465425 GGT7Q9UJ14 662 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 STRIP2Q9ULQ0 834 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 ARL2BPQ9Y2Y0 163 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 TCRBV5S1A1TA0A578 114 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 FAM47DPA6NHR8 397 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 PTPN7P35236 360 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 LACTBP83111 547 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-204ENST00000465425 LAMTOR4Q0VGL1 99 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 TXNRD3NBQ6F5E7 133 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 PAIP2Q9BPZ3 127 aaKnown RBP19.32■□□□□ 0.68
SYNE4-204ENST00000465425 TMEM121Q9BTD3 319 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 VPS37BQ9H9H4 285 aa19.32■□□□□ 0.68
SYNE4-204ENST00000465425 CFAP73A6NFT4 308 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 POC1B-GALNT4F8VUJ3 575 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 PEX10O60683 326 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 UBOX5O94941 541 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 TGFB3P10600 412 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 POLR2BP30876 1174 aaKnown RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 TMEM132AQ24JP5 1023 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 NOL9Q5SY16 702 aaKnown RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 METTL7BQ6UX53 244 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 LBX2Q6XYB7 198 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 NCAPG2Q86XI2 1143 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 NIPA2Q8N8Q9 360 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 EURLQ9NYK6 297 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 CPSF3Q9UKF6 684 aaKnown RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 PCDHGC3Q9UN70 934 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 LCTP09848 1927 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 ZBTB7AO95365 584 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 TNNC2P02585 160 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 ITGAVP06756 1048 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 CDKN2BP42772 138 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 YWHAEP62258 255 aaKnown RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 ELF3P78545 371 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 SH3D19Q5HYK7 790 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 HP1BP3Q5SSJ5 553 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 PPP1R15BQ5SWA1 713 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 CDCA2Q69YH5 1023 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-204ENST00000465425 CENPUQ71F23 418 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 ZBED8Q8IZ13 594 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 ANKRD36BP1Q96IX9 119 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 UBN1Q9NPG3 1134 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 KLHL14Q9P2G3 628 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 PPME1Q9Y570 386 aa19.31■□□□□ 0.68
SYNE4-204ENST00000465425 GOLGA8SH3BPF8 625 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 GAS2O43903 313 aaKnown RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 MGRN1O60291 552 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 CD19P15391 556 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 KRT15P19012 456 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 PSMA2P25787 234 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 CDH5P33151 784 aaPredicted RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 OASLQ15646 514 aaKnown RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 LY6KQ17RY6 165 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 TMEM63BQ5T3F8 832 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 CCDC91Q7Z6B0 441 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 TBC1D1Q86TI0 1168 aaPredicted RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 THNSL1Q8IYQ7 743 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 LRRC71Q8N4P6 559 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 WDTC1Q8N5D0 677 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 TFAP2BQ92481 460 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 MAML1Q92585 1016 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 NKD2Q969F2 451 aaPredicted RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 PCDH9Q9HC56 1237 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 EDNRBP24530 442 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 FASTKD3Q14CZ7 662 aaKnown RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 TREML2Q5T2D2 321 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 CAPN12Q6ZSI9 719 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 POLNQ7Z5Q5 900 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 RIOX2Q8IUF8 465 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 C2orf40Q9H1Z8 148 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 NXF1Q9UBU9 619 aaKnown RBP19.3■□□□□ 0.68
SYNE4-204ENST00000465425 SHOC2Q9UQ13 582 aa19.3■□□□□ 0.68
SYNE4-204ENST00000465425 NOP56O00567 594 aaKnown RBP19.29■□□□□ 0.68
SYNE4-204ENST00000465425 KRT3P12035 628 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 ASPAP45381 313 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 OSTNP61366 133 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 DYNLT1P63172 113 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 WDR72Q3MJ13 1102 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 RNASEH2BQ5TBB1 312 aaKnown RBP19.29■□□□□ 0.68
SYNE4-204ENST00000465425 POTEAQ6S8J7 498 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 TRABD2AQ86V40 505 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 PNMA8AQ86V59 439 aaPredicted RBP19.29■□□□□ 0.68
SYNE4-204ENST00000465425 CEP57Q86XR8 500 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 TDRPQ86YL5 185 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 RHPN2Q8IUC4 686 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 EXOC8Q8IYI6 725 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 GRAMD1AQ96CP6 724 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 PITPNM3Q9BZ71 974 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 ZWILCHQ9H900 591 aa19.29■□□□□ 0.68
SYNE4-204ENST00000465425 BTBD7Q9P203 1132 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms