RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 PCDHGC3Q9UN70 934 aa16.42■□□□□ 0.22
GYPC-205ENST00000464053 A8MXQ7 604 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 ATMINO43313 823 aaPredicted RBP16.41■□□□□ 0.22
GYPC-205ENST00000464053 VDRP11473 427 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 RAG1P15918 1043 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 CASQ1P31415 396 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 BRCC3P46736 316 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 AARSP49588 968 aaKnown RBP eCLIP16.41■□□□□ 0.221e-6■■■■□ 20.6
GYPC-205ENST00000464053 NAP1L1P55209 391 aaKnown RBP16.41■□□□□ 0.22
GYPC-205ENST00000464053 IKBKEQ14164 716 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 DSTYKQ6XUX3 929 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 TRIM72Q6ZMU5 477 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 UNC93AQ86WB7 457 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 RNF10Q8N5U6 811 aaKnown RBP16.41■□□□□ 0.22
GYPC-205ENST00000464053 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 UROC1Q96N76 676 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 OSGEPQ9NPF4 335 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 HCSTQ9UBK5 93 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 STXBP5LQ9Y2K9 1186 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 TIMM13Q9Y5L4 95 aaPredicted RBP16.41■□□□□ 0.22
GYPC-205ENST00000464053 NCANO14594 1321 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 LTBP2Q14767 1821 aa16.41■□□□□ 0.22
GYPC-205ENST00000464053 FNDC1Q4ZHG4 1894 aaPredicted RBP16.41■□□□□ 0.22
GYPC-205ENST00000464053 KIF4AO95239 1232 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 WARSP23381 471 aaKnown RBP16.4■□□□□ 0.22
GYPC-205ENST00000464053 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
GYPC-205ENST00000464053 RNASELQ05823 741 aaKnown RBP16.4■□□□□ 0.22
GYPC-205ENST00000464053 SGO2Q562F6 1265 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 ABI1Q8IZP0 508 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 C1orf131Q8NDD1 294 aaKnown RBP16.4■□□□□ 0.22
GYPC-205ENST00000464053 SLC35G2Q8TBE7 412 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 NOX5Q96PH1 765 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 SNX25Q9H3E2 840 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.225e-6■■□□□ 11.8
GYPC-205ENST00000464053 O00370 1275 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 MED7O43513 233 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 MICAL2O94851 1124 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 UPP2O95045 317 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 NOP2P46087 812 aaKnown RBP16.4■□□□□ 0.22
GYPC-205ENST00000464053 GPC5P78333 572 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 PPP1R26Q5T8A7 1209 aaPredicted RBP16.4■□□□□ 0.22
GYPC-205ENST00000464053 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 LLGL2Q6P1M3 1020 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 DCLRE1AQ6PJP8 1040 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 NPAS4Q8IUM7 802 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 FAM49BQ9NUQ9 324 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 CYTH4Q9UIA0 394 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 COG5Q9UP83 839 aa16.4■□□□□ 0.22
GYPC-205ENST00000464053 TSC2P49815 1807 aa16.39■□□□□ 0.22
GYPC-205ENST00000464053 A0A0A6YYK5 440 aaPredicted RBP16.39■□□□□ 0.21
GYPC-205ENST00000464053 GABRDO14764 452 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 ACRP10323 421 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 CDH5P33151 784 aaPredicted RBP16.39■□□□□ 0.21
GYPC-205ENST00000464053 PTP4A2Q12974 167 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 CNGA2Q16280 664 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 CCDC142Q17RM4 750 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.39■□□□□ 0.21
GYPC-205ENST00000464053 MON1BQ7L1V2 547 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 PHF13Q86YI8 300 aaPredicted RBP16.39■□□□□ 0.21
GYPC-205ENST00000464053 CRYBG2Q8N1P7 616 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 RFFLQ8WZ73 363 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 ZNF653Q96CK0 615 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 FAM193BQ96PV7 902 aaPredicted RBP16.39■□□□□ 0.21
GYPC-205ENST00000464053 C11orf70Q9BRQ4 267 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 NRDE2Q9H7Z3 1164 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 KIAA1257Q9ULG3 409 aa16.39■□□□□ 0.21
GYPC-205ENST00000464053 GRID2IPA4D2P6 1211 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 TBKBP1A7MCY6 615 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 ENC1O14682 589 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 ATP2C2O75185 946 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 PALMO75781 387 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 LSM8O95777 96 aaKnown RBP16.38■□□□□ 0.21
GYPC-205ENST00000464053 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
GYPC-205ENST00000464053 OR1G1P47890 313 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 KIAA0319Q5VV43 1072 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 MMS22LQ6ZRQ5 1243 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 TMCO2Q7Z6W1 182 aaPredicted RBP16.38■□□□□ 0.21
GYPC-205ENST00000464053 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 RSPH1Q8WYR4 309 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 GOLPH3Q9H4A6 298 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 TSPAN16Q9UKR8 245 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
GYPC-205ENST00000464053 PCDHGC5Q9Y5F6 944 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 M0QYV0 167 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 M0QZQ0 153 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 CYP1A2P05177 515 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 RRM1P23921 792 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 PSMC1P62191 440 aaKnown RBP16.38■□□□□ 0.21
GYPC-205ENST00000464053 LCLAT1Q6UWP7 414 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 TPCN2Q8NHX9 752 aa16.38■□□□□ 0.21
GYPC-205ENST00000464053 DDX43Q9NXZ2 648 aaKnown RBP16.38■□□□□ 0.21
GYPC-205ENST00000464053 ADAM22Q9P0K1 906 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms