RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SLC10A2Q12908 348 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-208ENST00000464001 TBCCQ15814 346 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 SRSF7Q16629 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
ITGB1-208ENST00000464001 RBM20Q5T481 1227 aaKnown RBP5.38□□□□□ -1.55
ITGB1-208ENST00000464001 ZNF551Q7Z340 670 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-208ENST00000464001 USP37Q86T82 979 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 FAM90A1Q86YD7 464 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 SEMA6DQ8NFY4 1073 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 FAM136AQ96C01 138 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 NELL2Q99435 816 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 SERTAD4Q9NUC0 356 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-208ENST00000464001 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-208ENST00000464001 WASHC2CQ9Y4E1 1318 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 CADPSQ9ULU8 1353 aa5.38□□□□□ -1.55
ITGB1-208ENST00000464001 NXPH3O95157 252 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 KIF20AO95235 890 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 EBLN1P0CF75 366 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 NDUFB7P17568 137 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 PDCP20941 246 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 DRD4P21917 467 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 RECQLP46063 649 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-208ENST00000464001 ZNF81P51508 661 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 TCF15Q12870 199 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 NOGQ13253 232 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 GRM1Q13255 1194 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 LLGL1Q15334 1064 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 EZH2Q15910 746 aaKnown RBP5.37□□□□□ -1.55
ITGB1-208ENST00000464001 TEDDM1Q5T9Z0 273 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 HEATR3Q7Z4Q2 680 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 DDB2Q92466 427 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 TNPO1Q92973 898 aaKnown RBP5.37□□□□□ -1.55
ITGB1-208ENST00000464001 C1QTNF7Q9BXJ2 289 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 TINAGL1Q9GZM7 467 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-208ENST00000464001 ARHGEF3Q9NR81 526 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 FLRT1Q9NZU1 646 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 AGAP1Q9UPQ3 857 aa5.37□□□□□ -1.55
ITGB1-208ENST00000464001 FNDC1Q4ZHG4 1894 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-208ENST00000464001 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 SNUPNO95149 360 aaKnown RBP5.36□□□□□ -1.55
ITGB1-208ENST00000464001 ZRANB2O95218 330 aaKnown RBP eCLIP5.36□□□□□ -1.55
ITGB1-208ENST00000464001 HNRNPCP07910 306 aaKnown RBP eCLIP5.36□□□□□ -1.55
ITGB1-208ENST00000464001 FAM163BP0C2L3 166 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 CHRM3P20309 590 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 GCLCP48506 637 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-208ENST00000464001 ALDH9A1P49189 494 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 HK3P52790 923 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 EVA1CP58658 441 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 FAM109AQ8N4B1 249 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 CPA6Q8N4T0 437 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 RGMAQ96B86 450 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 MRPL46Q9H2W6 279 aaKnown RBP5.36□□□□□ -1.55
ITGB1-208ENST00000464001 WDR26Q9H7D7 661 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 MRPS18AQ9NVS2 196 aaKnown RBP5.36□□□□□ -1.55
ITGB1-208ENST00000464001 DKK3Q9UBP4 350 aa5.36□□□□□ -1.55
ITGB1-208ENST00000464001 WDR91A4D1P6 747 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 LINC01548A6NM66 108 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 TARM1B6A8C7 271 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 FTLP02792 175 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-208ENST00000464001 ERBB2P04626 1255 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 ZNF618Q5T7W0 954 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 SFRP4Q6FHJ7 346 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-208ENST00000464001 CEP85Q6P2H3 762 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 USP45Q70EL2 814 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 C1QL2Q7Z5L3 287 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 PPP1R32Q7Z5V6 425 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 SMAD5Q99717 465 aaKnown RBP5.35□□□□□ -1.55
ITGB1-208ENST00000464001 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-208ENST00000464001 LMBRD1Q9NUN5 540 aa5.35□□□□□ -1.55
ITGB1-208ENST00000464001 M0QYG6 137 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 JTBO76095 146 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 TOB1P50616 345 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-208ENST00000464001 TFF2Q03403 129 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 FAM160B1Q5W0V3 765 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 ANKRD16Q6P6B7 361 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 ZNF778Q96MU6 729 aa5.34□□□□□ -1.55
ITGB1-208ENST00000464001 ZNF70Q9UC06 446 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-208ENST00000464001 TLR5O60602 858 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 TYRP14679 529 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 TMEM119Q4V9L6 283 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 VPS53Q5VIR6 699 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 ICE2Q659A1 982 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 LAYNQ6UX15 382 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 TMEM108Q6UXF1 575 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 DTX2Q86UW9 622 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 VGLL2Q8N8G2 317 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 FAM46DQ8NEK8 389 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 TBC1D5Q92609 795 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 ASPSCR1Q9BZE9 553 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 SEMA4CQ9C0C4 833 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 PNPOQ9NVS9 261 aa5.33□□□□□ -1.56
ITGB1-208ENST00000464001 ZNF804BA4D1E1 1349 aa5.32□□□□□ -1.56
ITGB1-208ENST00000464001 PPM1DO15297 605 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms