RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 TGFB3P10600 412 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 SARSP49591 514 aaKnown RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 PTK7Q13308 1070 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 LBRQ14739 615 aaKnown RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 DCAF6Q58WW2 860 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 C9orf72Q96LT7 481 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 SEPT5Q99719 369 aaPredicted RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 COLEC11Q9BWP8 271 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 YY1AP1Q9H869 796 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 STAG3L1P0CL83 205 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 GTF2H3Q13889 308 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 CAPRIN1Q14444 709 aaKnown RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 LONRF1Q17RB8 773 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 CATSPER1Q8NEC5 780 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 FAM161BQ96MY7 647 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 KDM4CQ9H3R0 1056 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 EIF3HO15372 352 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 RBP3P10745 1247 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 STX3Q13277 289 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 TMEM119Q4V9L6 283 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 CBWD2Q8IUF1 395 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 ATP6V0D2Q8N8Y2 350 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 PIP4K2CQ8TBX8 421 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 CELF4Q9BZC1 486 aaKnown RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 MRPL46Q9H2W6 279 aaKnown RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 PRDM5Q9NQX1 630 aaPredicted RBP14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
CHRNA4-202ENST00000463705 FRMD3A2A2Y4 597 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 HOXA2O43364 376 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 TLR2O60603 784 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 PGM5Q15124 567 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 RGS9BPQ6ZS82 235 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 RNF135Q8IUD6 432 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 ZNF512Q96ME7 567 aaPredicted RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 SLITRK1Q96PX8 696 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 XPO6Q96QU8 1125 aaKnown RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 ADA2Q9NZK5 511 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 DSEQ9UL01 958 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 GFAPP14136 432 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 TFB1MQ8WVM0 346 aaKnown RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 GLT1D1Q96MS3 346 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 ANXA9O76027 345 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 FBXO21O94952 628 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 KRT16P08779 473 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 SETSIPP0DME0 302 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 CYP11B1P15538 503 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 KCNA2P16389 499 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 OR1G1P47890 313 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 CXCL9Q07325 125 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 PTK6Q13882 451 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 USP10Q14694 798 aaKnown RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 DNAL1Q4LDG9 190 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 DDX42Q86XP3 938 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 CCNJLQ8IV13 435 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 TBC1D19Q8N5T2 526 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 HIPK4Q8NE63 616 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 RIN2Q8WYP3 895 aaPredicted RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 CXCL11O14625 94 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 PRRG1O14668 218 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 SGPL1O95470 568 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 HOXA10P31260 410 aaPredicted RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 HARS2P49590 506 aaKnown RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 TDRD10Q5VZ19 366 aaKnown RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 ANO5Q75V66 913 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 ZNF473Q8WTR7 871 aaKnown RBP14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 AGAP3Q96P47 875 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 SERPINB12Q96P63 405 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 CBWD1Q9BRT8 395 aa14.04□□□□□ -0.16
CHRNA4-202ENST00000463705 NDUFS3O75489 264 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 F9P00740 461 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 PYGLP06737 847 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 KCNJ1P48048 391 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MCL1Q07820 350 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 IL31Q6EBC2 164 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 SLC5A5Q92911 643 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 SH3KBP1Q96B97 665 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 ZIM3Q96PE6 472 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 AIPL1Q9NZN9 384 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 USP15Q9Y4E8 981 aaPredicted RBP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 SLC30A1Q9Y6M5 507 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 GRAP2O75791 330 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 HIST1H2AGP0C0S8 130 aaPredicted RBP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MYL2P10916 166 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 HIST1H2ADP20671 130 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MGAT5BQ3V5L5 792 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 CYP4A22Q5TCH4 519 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 EFL1Q7Z2Z2 1120 aaKnown RBP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 OR2W6PQ8NHA6 318 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 SPIRE2Q8WWL2 714 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 HIST1H2AHQ96KK5 128 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 HIST1H2AJQ99878 128 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 H2AFJQ9BTM1 129 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 CHMP2BQ9UQN3 213 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 VPS9D1Q9Y2B5 631 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 DUSP10Q9Y6W6 482 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms