RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TMEM196Q5HYL7 178 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 GPIHBP1Q8IV16 184 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 CMTM8Q8IZV2 173 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 TTC8Q8TAM2 541 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 AK8Q96MA6 479 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 PLIN2Q99541 437 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 LPIN3Q9BQK8 851 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 ASB7Q9H672 318 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 PARVGQ9HBI0 331 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
HMGN1-209ENST00000463631 TCHHQ07283 1943 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 EML5Q05BV3 1969 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 SOBPA7XYQ1 873 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 EXTL3O43909 919 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 AKAP3O75969 853 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 EPN2O95208 641 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 RAP1GAPP47736 663 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 MGAT5BQ3V5L5 792 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 SPPL2BQ8TCT7 592 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 KIF2CQ99661 725 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 SLC46A2Q9BY10 475 aa18.7■□□□□ 0.58
HMGN1-209ENST00000463631 TRDMT1O14717 391 aaKnown RBP18.69■□□□□ 0.58
HMGN1-209ENST00000463631 ATG13O75143 517 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 RPP40O75818 363 aaKnown RBP18.69■□□□□ 0.58
HMGN1-209ENST00000463631 NEFLP07196 543 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 ZNF806P0C7X5 589 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 HOXC13P31276 330 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 GTF2BQ00403 316 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 POU5F1Q01860 360 aaKnown RBP18.69■□□□□ 0.58
HMGN1-209ENST00000463631 PKN3Q6P5Z2 889 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 TMEM150AQ86TG1 271 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 CHFRQ96EP1 664 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 FIZ1Q96SL8 496 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 KIF9Q9HAQ2 790 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 HPS4Q9NQG7 708 aa18.69■□□□□ 0.58
HMGN1-209ENST00000463631 FAM208BQ5VWN6 2430 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 TM4SF5O14894 197 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 TRAK2O60296 914 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 FAM13AO94988 1023 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 HAPLN1P10915 354 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-209ENST00000463631 DDX6P26196 483 aaKnown RBP eCLIP18.68■□□□□ 0.58
HMGN1-209ENST00000463631 TAF6P49848 677 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 AASDHQ4L235 1098 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-209ENST00000463631 IL31Q6EBC2 164 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 FSTL4Q6MZW2 842 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 CACNA2D4Q7Z3S7 1137 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 METTL23Q86XA0 190 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 THEM5Q8N1Q8 247 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 MYCT1Q8N699 235 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 LRRC15Q8TF66 581 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 SMG9Q9H0W8 520 aaKnown RBP18.68■□□□□ 0.58
HMGN1-209ENST00000463631 GKN1Q9NS71 199 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 PCDHGA5Q9Y5G8 931 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 STYXL1Q9Y6J8 313 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 ZNF638Q14966 1978 aaKnown RBP18.68■□□□□ 0.58
HMGN1-209ENST00000463631 LAMA1P25391 3075 aa18.68■□□□□ 0.58
HMGN1-209ENST00000463631 FRYQ5TBA9 3013 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 CYB561D2O14569 222 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 HMGA1P17096 107 aaKnown RBP18.67■□□□□ 0.58
HMGN1-209ENST00000463631 AVPR1AP37288 418 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 NLRP12P59046 1061 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 GRSF1Q12849 480 aaKnown RBP eCLIP18.67■□□□□ 0.58
HMGN1-209ENST00000463631 RUNX3Q13761 415 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 SF3A2Q15428 464 aaKnown RBP18.67■□□□□ 0.58
HMGN1-209ENST00000463631 TAF12Q16514 161 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 PLA2G2CQ5R387 149 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 MCTP1Q6DN14 999 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 LRRTM3Q86VH5 581 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 CAMKK1Q8N5S9 505 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 C12orf50Q8NA57 414 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-209ENST00000463631 USP13Q92995 863 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-209ENST00000463631 FAM212AQ96EL1 285 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 ZC3H10Q96K80 434 aaKnown RBP18.67■□□□□ 0.58
HMGN1-209ENST00000463631 ARRDC1-AS1Q9H2J1 176 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 ST6GALNAC4Q9H4F1 302 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 BLOC1S4Q9NUP1 217 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 CCL26Q9Y258 94 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 KIAA1549LQ6ZVL6 1849 aa18.67■□□□□ 0.58
HMGN1-209ENST00000463631 OTOL1A6NHN0 477 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-209ENST00000463631 F11P03951 625 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 PMLP29590 882 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 ACOT2P49753 483 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 SHC2P98077 582 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 AMPD2Q01433 879 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 ZNF268Q14587 947 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-209ENST00000463631 KBTBD6Q86V97 674 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 DCP1BQ8IZD4 617 aaKnown RBP18.66■□□□□ 0.58
HMGN1-209ENST00000463631 CALML4Q96GE6 196 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 PYM1Q9BRP8 204 aaKnown RBP18.66■□□□□ 0.58
HMGN1-209ENST00000463631 TDP1Q9NUW8 608 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 DPP3Q9NY33 737 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 ANGPTL2Q9UKU9 493 aa18.66■□□□□ 0.58
HMGN1-209ENST00000463631 IGF2RP11717 2491 aa18.65■□□□□ 0.58
HMGN1-209ENST00000463631 TBCAO75347 108 aaKnown RBP18.65■□□□□ 0.58
HMGN1-209ENST00000463631 NMT1P30419 496 aaKnown RBP18.65■□□□□ 0.58
HMGN1-209ENST00000463631 UBA7P41226 1012 aa18.65■□□□□ 0.58
HMGN1-209ENST00000463631 BFSP1Q12934 665 aa18.65■□□□□ 0.58
HMGN1-209ENST00000463631 SV2CQ496J9 727 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms