RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BTBD2Q9BX70 525 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 DHX36Q9H2U1 1008 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 PRDM12Q9H4Q4 367 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 NCOA5Q9HCD5 579 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ABCF2Q9UG63 623 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MAST2Q6P0Q8 1798 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MROH7-TTC4A0A0A0MT08 1334 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ZNF532Q9HCE3 1301 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MGAMO43451 1857 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 KBTBD13C9JR72 458 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ERC2O15083 957 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 RNF113AO15541 343 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 TIMP1P01033 207 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 LDHCP07864 332 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 SELENOPP49908 381 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 IRF9Q00978 393 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 FPGSQ05932 587 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 STILQ15468 1287 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ZMAT1Q5H9K5 638 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 TMEM31Q5JXX7 168 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 TMEM240Q5SV17 173 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 KANK2Q63ZY3 851 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 CWC27Q6UX04 472 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 DZIP1Q86YF9 867 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 OR14K1Q8NGZ2 314 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 PPM1EQ8WY54 764 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 DLG3Q92796 817 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 FERMT2Q96AC1 680 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 EVI5LQ96CN4 794 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 SNX27Q96L92 541 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ZNF747Q9BV97 191 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 MRPL4Q9BYD3 311 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 OSBPL2Q9H1P3 480 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 OR10A5Q9H207 317 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 DNAJC18Q9H819 358 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ARMT1Q9H993 441 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 NRBP1Q9UHY1 535 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 FAM184BQ9ULE4 1060 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 OAZ3Q9UMX2 235 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 B3GALT1Q9Y5Z6 326 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 MYH13Q9UKX3 1938 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 CHD7Q9P2D1 2997 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 GRXCR1A8MXD5 290 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 CDC45O75419 566 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 APPP05067 770 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 MRE11P49959 708 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 CDK7P50613 346 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ZNF460Q14592 562 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 EIF4HQ15056 248 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 AAK1Q2M2I8 961 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 SHROOM1Q2M3G4 852 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 PRAMEF19Q5SWL8 479 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 SLC9C2Q5TAH2 1124 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 AGBL4Q5VU57 503 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 MFSD5Q6N075 450 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ABRAQ8N0Z2 381 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 HERVK_113Q902F9 699 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 GPATCH3Q96I76 525 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 CDK5RAP1Q96SZ6 601 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 RIOK1Q9BRS2 568 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 PAGR1Q9BTK6 254 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 LSG1Q9H089 658 aaKnown RBP4.25□□□□□ -1.73
SCFD1-204ENST00000463622 VPS11Q9H270 941 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 RAI14Q9P0K7 980 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 TBX21Q9UL17 535 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 ZBTB21Q9ULJ3 1066 aa4.25□□□□□ -1.73
SCFD1-204ENST00000463622 CYP2D7A0A087X1C5 515 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 A0A0G2JNJ9 132 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 PI4K2BG5E9Z4 385 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 GOLGA6L22H0YM25 854 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 PPP1R12AO14974 1030 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-204ENST00000463622 ARHGAP6O43182 974 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 GPAA1O43292 621 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 MBD4O95243 580 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 CYP2D6P10635 497 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 STAT3P40763 770 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 GSTO1P78417 241 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 SQSTM1Q13501 440 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 SF3A1Q15459 793 aaKnown RBP4.24□□□□□ -1.73
SCFD1-204ENST00000463622 ANO1Q5XXA6 986 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 CCSAPQ6IQ19 270 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-204ENST00000463622 TATDN1Q6P1N9 297 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 CXXC5Q7LFL8 322 aaKnown RBP4.24□□□□□ -1.73
SCFD1-204ENST00000463622 DPP9Q86TI2 863 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 SLC44A5Q8NCS7 719 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 SHCBP1Q8NEM2 672 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 KLHDC9Q8NEP7 349 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 SDR42E1Q8WUS8 393 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 APPBP2Q92624 585 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 MOV10L1Q9BXT6 1211 aaKnown RBP4.24□□□□□ -1.73
SCFD1-204ENST00000463622 AATFQ9NY61 560 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCFD1-204ENST00000463622 HOXC10Q9NYD6 342 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 SAMD15Q9P1V8 674 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 Q9UFV3 132 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 PLXNB2O15031 1838 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 AK9Q5TCS8 1911 aa4.24□□□□□ -1.73
SCFD1-204ENST00000463622 XIRP2A4UGR9 3374 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 MYH7P12883 1935 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 DVL2O14641 736 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms