RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 C15orf39Q6ZRI6 1047 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 DNAAF5Q86Y56 855 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 PALB2Q86YC2 1186 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 CBWD2Q8IUF1 395 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 GPD1LQ8N335 351 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 UBL4BQ8N7F7 174 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 ASAP3Q8TDY4 903 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 SLC20A1Q8WUM9 679 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 RIN2Q8WYP3 895 aaPredicted RBP10.55□□□□□ -0.72
PTPRD-207ENST00000463477 BSNDQ8WZ55 320 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 IFT74Q96LB3 600 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
PTPRD-207ENST00000463477 RAB17Q9H0T7 212 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 TAS2R14Q9NYV8 317 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 UVRAGQ9P2Y5 699 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 FAM153AQ9UHL3 310 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 GTF3C4Q9UKN8 822 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 PCDHB7Q9Y5E2 793 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 STYXL1Q9Y6J8 313 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 PTPRSQ13332 1948 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 COL6A3P12111 3177 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 EOMESO95936 686 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 CYP1A2P05177 515 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 POU3F3P20264 500 aaPredicted RBP10.54□□□□□ -0.72
PTPRD-207ENST00000463477 ABCB4P21439 1286 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 GBP1P32455 592 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 PHKA2P46019 1235 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 MRPS25P82663 173 aaKnown RBP10.54□□□□□ -0.72
PTPRD-207ENST00000463477 CDR2Q01850 454 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 PRPF4BQ13523 1007 aaKnown RBP10.54□□□□□ -0.72
PTPRD-207ENST00000463477 CAPSQ13938 189 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 DCAF12L1Q5VU92 463 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 CATSPER4Q7RTX7 472 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 NOP9Q86U38 636 aaKnown RBP10.54□□□□□ -0.72
PTPRD-207ENST00000463477 ZNF677Q86XU0 584 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 ZSWIM2Q8NEG5 633 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 IFT81Q8WYA0 676 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 PIK3R5Q8WYR1 880 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 SAMD11Q96NU1 681 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 POLR3FQ9H1D9 316 aaPredicted RBP10.54□□□□□ -0.72
PTPRD-207ENST00000463477 PRDM12Q9H4Q4 367 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 MINDY3Q9H8M7 445 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 RAB20Q9NX57 234 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 TMEM161AQ9NX61 479 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 LRFN2Q9ULH4 789 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 COG5Q9UP83 839 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 ALG6Q9Y672 507 aa10.54□□□□□ -0.72
PTPRD-207ENST00000463477 ESYT3A0FGR9 886 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 SRRM3A6NNA2 597 aaPredicted RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 EXTL3O43909 919 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ZNF623O75123 536 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 FGGP02679 453 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CTNNA2P26232 953 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 AXLP30530 894 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 HOXA11P31270 313 aaPredicted RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 RNASE9P60153 205 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 FMO1Q01740 532 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 TTMPQ5BVD1 217 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 LRRC31Q6UY01 552 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 FIBCD1Q8N539 461 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 POMGNT1Q8WZA1 660 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 SEMA4DQ92854 862 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CLP1Q92989 425 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CD101Q93033 1021 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 RUNDC3BQ96NL0 473 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 PCDHB18PQ96TA0 734 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 GAS2L1Q99501 681 aaPredicted RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ZSWIM1Q9BR11 485 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 DDX47Q9H0S4 455 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CTTNBP2NLQ9P2B4 639 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 UTP11Q9Y3A2 253 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 GBF1Q92538 1859 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ADGRA3Q8IWK6 1321 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 GOLGA8IPA6NC78 632 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ZNF233A6NK53 670 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 GOLGA8JA6NMD2 632 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 HMGB1P1B2RPK0 211 aaPredicted RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 SKIP12755 728 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CYP11B1P15538 503 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 NAMPTP43490 491 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 PEX5P50542 639 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 PDE6CP51160 858 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 BTG3Q14201 252 aaPredicted RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 PSMD6Q15008 389 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 KDM7AQ6ZMT4 941 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 SV2AQ7L0J3 742 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 TAS1R3Q7RTX0 852 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ECHDC2Q86YB7 292 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CMTR2Q8IYT2 770 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 ARNTL2Q8WYA1 636 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 KAT5Q92993 513 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 HINFPQ9BQA5 517 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 AP1M1Q9BXS5 423 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms