RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 MYMKA6NI61 221 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 H0Y3Z8 333 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 RARGP13631 454 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 CREB1P16220 341 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 YY1P25490 414 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 DNAJB2P25686 324 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 TPP2P29144 1249 aaPredicted RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 HOXA7P31268 230 aaPredicted RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 RENBPP51606 427 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 FKBP3Q00688 224 aaKnown RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 OCRLQ01968 901 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 RCN2Q14257 317 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 QRICH1Q2TAL8 776 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 CATSPERGQ6ZRH7 1159 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 INTS8Q75QN2 995 aaKnown RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 DNAAF5Q86Y56 855 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 GPKOWQ92917 476 aaPredicted RBP eCLIP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 ARHGEF2Q92974 986 aaKnown RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 SLC7A6OSQ96CW6 309 aaPredicted RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 WNK4Q96J92 1243 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 MAGEB18Q96M61 343 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 TGS1Q96RS0 853 aaKnown RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 GANQ9H2C0 597 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 VCX3BQ9H321 246 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 DENND2DQ9H6A0 471 aaPredicted RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 VCX3AQ9NNX9 186 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 PDP2Q9P2J9 529 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 MTRF1LQ9UGC7 380 aaKnown RBP9.19□□□□□ -0.94
SHQ1-203ENST00000463369 HAO1Q9UJM8 370 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 AMFRQ9UKV5 643 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 EFR3BQ9Y2G0 817 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 SLC4A7Q9Y6M7 1214 aa9.19□□□□□ -0.94
SHQ1-203ENST00000463369 ATP9AO75110 1047 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 ENTPD5O75356 428 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 TJP3O95049 919 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 FGFR4P22455 802 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
SHQ1-203ENST00000463369 PTGIRP43119 386 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 SCNN1BP51168 640 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 YARSP54577 528 aaKnown RBP9.18□□□□□ -0.94
SHQ1-203ENST00000463369 MAPK7Q13164 816 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 MOGSQ13724 837 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 COG2Q14746 738 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 INF2Q27J81 1249 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 EML3Q32P44 896 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 FASTKD5Q7L8L6 764 aaKnown RBP9.18□□□□□ -0.94
SHQ1-203ENST00000463369 HEATR3Q7Z4Q2 680 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 LCA5Q86VQ0 697 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 MIPOL1Q8TD10 442 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 LRRC8CQ8TDW0 803 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 SERPINB12Q96P63 405 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 GBP5Q96PP8 586 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 RASAL2Q9UJF2 1139 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 PPP1R9AQ9ULJ8 1098 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 TMCO1Q9UM00 188 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 NENFQ9UMX5 172 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 ADAMTS5Q9UNA0 930 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 PCDHGB3Q9Y5G1 929 aa9.18□□□□□ -0.94
SHQ1-203ENST00000463369 ESYT2A0FGR8 921 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 ZBBXA8MT70 800 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 TRAFD1O14545 582 aaPredicted RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 DDX3YO15523 660 aaKnown RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 H2AFZP0C0S5 128 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 T-ENOLP0DO92 83 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 EPHB2P29323 1055 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 ATP5DP30049 168 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 RPL21P46778 160 aaKnown RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 RASSF2P50749 326 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 FXR2P51116 673 aaKnown RBP eCLIP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 POLGP54098 1239 aaPredicted RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 NAPAP54920 295 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 HUNKP57058 714 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 PURAQ00577 322 aaKnown RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 SNAPC2Q13487 334 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 MPP2Q14168 576 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 TCEA2Q15560 299 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 ZCWPW2Q504Y3 356 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 TREML2Q5T2D2 321 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 DCAF12L1Q5VU92 463 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 SNX30Q5VWJ9 437 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 GALNT17Q6IS24 598 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 H2AFVQ71UI9 128 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 OTUD6AQ7L8S5 288 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 SAPCD2Q86UD0 394 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 TRIM59Q8IWR1 403 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 ZNF784Q8NCA9 323 aaPredicted RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 GDAP1Q8TB36 358 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
SHQ1-203ENST00000463369 COA7Q96BR5 231 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 RUNDC3BQ96NL0 473 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 AMNQ9BXJ7 453 aa9.17□□□□□ -0.94
SHQ1-203ENST00000463369 PITPNM3Q9BZ71 974 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms