RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ACBD3Q9H3P7 528 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MRPL47Q9HD33 250 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 HMGXB4Q9UGU5 601 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 CEP83Q9Y592 693 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MYO1FO00160 1098 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MED7O43513 233 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 CILPO75339 1184 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 RPS6KA5O75582 802 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 STAU1O95793 577 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 RPLP2P05387 115 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 CALB1P05937 261 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 AKAP5P24588 427 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 TNFRSF8P28908 595 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 THPOP40225 353 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 GUCY2DQ02846 1103 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MAMLD1Q13495 774 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 CLUL1Q15846 466 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 TWF2Q6IBS0 349 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 PLEKHA7Q6IQ23 1121 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 LEKR1Q6ZMV7 388 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 ADAT2Q7Z6V5 191 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 IFT20Q8IY31 132 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 SLC4A11Q8NBS3 891 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 WHAMMQ8TF30 809 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 ZBTB9Q96C00 473 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 GLT1D1Q96MS3 346 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 ZMAT2Q96NC0 199 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 TWNKQ96RR1 684 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 ELOVL4Q9GZR5 314 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MED4Q9NPJ6 270 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 PCDHA3Q9Y5H8 950 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 ZSCAN5CA6NGD5 496 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 PROSCO94903 275 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 GJB6O95452 261 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 CDH5P33151 784 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 GLRA4Q5JXX5 417 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 BEST2Q8NFU1 509 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 AENQ8WTP8 325 aaKnown RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 ZNF518BQ9C0D4 1074 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 EPB41L5Q9HCM4 733 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 GDF3Q9NR23 364 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 PARVAQ9NVD7 372 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 TUBGCP4Q9UGJ1 667 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 FEZ2Q9UHY8 353 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 NOD1Q9Y239 953 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 IPPQ9Y573 584 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 CEP350Q5VT06 3117 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 GOLGA6L10A0A0M3HER8 536 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 SART1O43290 800 aaKnown RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 PYGMP11217 842 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 SLC1A1P43005 524 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 RWDD2BP57060 319 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 PTPN11Q06124 597 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 MYO1EQ12965 1108 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 WDTC1Q8N5D0 677 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 C18orf25Q96B23 403 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-213ENST00000462730 TMEM176AQ96HP8 235 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 SLITRK6Q9H5Y7 841 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 VIPAS39Q9H9C1 493 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 CNTN3Q9P232 1028 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 ST3GAL5Q9UNP4 418 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 NR2E1Q9Y466 385 aa15.35■□□□□ 0.05
HDAC6-213ENST00000462730 A0A1W2PQ45 241 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-213ENST00000462730 A0A1W2PQY0 241 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 ESYT3A0FGR9 886 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 PPEF2O14830 753 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 IVLP07476 585 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 NFX1Q12986 1120 aaKnown RBP15.34■□□□□ 0.05
HDAC6-213ENST00000462730 DNAJC24Q6P3W2 148 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 ALKAL1Q6UXT8 129 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 ERICH1Q86X53 443 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 SMG8Q8ND04 991 aaKnown RBP15.34■□□□□ 0.05
HDAC6-213ENST00000462730 FEZF2Q8TBJ5 459 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 CASKIN2Q8WXE0 1202 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 GDAP1L1Q96MZ0 367 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 TSEN34Q9BSV6 310 aaKnown RBP15.34■□□□□ 0.05
HDAC6-213ENST00000462730 BEGAINQ9BUH8 593 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC6-213ENST00000462730 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 RNF19AQ9NV58 838 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
HDAC6-213ENST00000462730 TLR3O15455 904 aaKnown RBP15.33■□□□□ 0.05
HDAC6-213ENST00000462730 PTK7Q13308 1070 aa15.33■□□□□ 0.05
HDAC6-213ENST00000462730 ZBTB6Q15916 424 aa15.33■□□□□ 0.05
HDAC6-213ENST00000462730 IFT81Q8WYA0 676 aa15.33■□□□□ 0.05
HDAC6-213ENST00000462730 LHX5Q9H2C1 402 aa15.33■□□□□ 0.05
HDAC6-213ENST00000462730 ERVK-5Q9HDB9 667 aa15.33■□□□□ 0.05
HDAC6-213ENST00000462730 KLK14Q9P0G3 267 aa15.33■□□□□ 0.05
HDAC6-213ENST00000462730 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.05
HDAC6-213ENST00000462730 HSPA6P17066 643 aa15.33■□□□□ 0.04
HDAC6-213ENST00000462730 AARSP49588 968 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC6-213ENST00000462730 CARSP49589 748 aaKnown RBP15.33■□□□□ 0.04
HDAC6-213ENST00000462730 NDST1P52848 882 aa15.33■□□□□ 0.04
HDAC6-213ENST00000462730 EPHB4P54760 987 aa15.33■□□□□ 0.04
HDAC6-213ENST00000462730 INCA1Q0VD86 236 aa15.33■□□□□ 0.04
HDAC6-213ENST00000462730 PAK2Q13177 524 aa15.33■□□□□ 0.04
HDAC6-213ENST00000462730 CYP4A22Q5TCH4 519 aa15.33■□□□□ 0.04
HDAC6-213ENST00000462730 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms