RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 KRT4P19013 534 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TNNI1P19237 187 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ACO1P21399 889 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 GLRA2P23416 452 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 GCAP28676 217 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 RXRBP28702 533 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 RPA3P35244 121 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CAP2P40123 477 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PTGER2P43116 358 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CTCFP49711 727 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CCNHP51946 323 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ARFIP2P53365 341 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 AP3M2P53677 418 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 YWHAEP62258 255 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SARNPP82979 210 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PLCB3Q01970 1234 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 GHRHRQ02643 423 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 KLC1Q07866 573 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SPP2Q13103 211 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PIGHQ14442 188 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 RBBP5Q15291 538 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 RCN1Q15293 331 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SLC1A5Q15758 541 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PKN2Q16513 984 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SGSM1Q2NKQ1 1148 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 NBPF20Q3BBV1 942 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ZACNQ401N2 412 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ZC3H12AQ5D1E8 599 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TFDP3Q5H9I0 405 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM63BQ5T3F8 832 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 C6orf163Q5TEZ5 329 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MEX3CQ5U5Q3 659 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 WDR78Q5VTH9 848 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ARHGEF16Q5VV41 709 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TDRD10Q5VZ19 366 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 AP1ARQ63HQ0 302 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 NAIF1Q69YI7 327 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SLFN12LQ6IEE8 588 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 STYK1Q6J9G0 422 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SLC39A4Q6P5W5 647 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 DCUN1D2Q6PH85 259 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 LVRNQ6Q4G3 990 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM270Q6UE05 265 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MFSD7Q6UXD7 560 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 C15orf39Q6ZRI6 1047 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CAPN12Q6ZSI9 719 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 OTOAQ7RTW8 1153 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CLNKQ7Z7G1 428 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CHSY1Q86X52 802 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ANKMY2Q8IV38 441 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CEP120Q8N960 986 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ANKLE1Q8NAG6 615 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM35BQ8NCS4 154 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 IL31RAQ8NI17 732 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 DEPTORQ8TB45 409 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SYTL5Q8TDW5 730 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PYROXD1Q8WU10 500 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SREK1Q8WXA9 508 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 RSAD2Q8WXG1 361 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CLEC4DQ8WXI8 215 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 NKD2Q969F2 451 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PBXIP1Q96AQ6 731 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 HAUS1Q96CS2 278 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SLC7A6OSQ96CW6 309 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 GPRASP2Q96D09 838 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 AGBL1Q96MI9 1066 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MCEEQ96PE7 176 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CYTH2Q99418 400 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PAFAH2Q99487 392 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TSC22D3Q99576 134 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CGRRF1Q99675 332 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SH3GL3Q99963 347 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PI4K2AQ9BTU6 479 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TSSK1BQ9BXA7 367 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TBC1D10AQ9BXI6 508 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF518BQ9C0D4 1074 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 FHDC1Q9C0D6 1143 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 YIPF3Q9GZM5 350 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 IQCGQ9H095 443 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MMADHCQ9H3L0 296 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 KIF9Q9HAQ2 790 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SLCO1B3Q9NPD5 702 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CYLDQ9NQC7 956 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 FBXO28Q9NVF7 368 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 KLHL11Q9NVR0 708 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 RBAKQ9NYW8 714 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 NKX1-2Q9UD57 310 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SCOCQ9UIL1 159 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ANGPTL2Q9UKU9 493 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 AGO2Q9UKV8 859 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 DNPEPQ9ULA0 475 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 EFR3BQ9Y2G0 817 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 LRCH1Q9Y2L9 728 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MYH14Q7Z406 1995 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SBF2Q86WG5 1849 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 A0A0G2JND7 137 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 KDM4FA0A1W2PPD8 638 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CLRN2A0PK11 232 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM150BA6NC51 233 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms