RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DSPP15924 2871 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 DMXL2Q8TDJ6 3036 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 NBEAQ8NFP9 2946 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 A0A1W2PRU2 124 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 SLC38A8A6NNN8 435 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 PRR5-ARHGAP8B1AHC4 643 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 K7ESF4 209 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 PPEF2O14830 753 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 TRAK2O60296 914 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 TBCAO75347 108 aaKnown RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 KRT37O76014 449 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 PAPSS2O95340 614 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 CCNE1P24864 410 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 GUCY2FP51841 1108 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 CASP5P51878 434 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 SMTNP53814 917 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 MLLT6P55198 1093 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ARHGAP8P85298 464 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 GTF2BQ00403 316 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 YWHAHQ04917 246 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 SRSF5Q13243 272 aaKnown RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZC2HC1CQ53FD0 456 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 LAIR1Q6GTX8 287 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 IQCEQ6IPM2 695 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 CNNM4Q6P4Q7 775 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZPBP2Q6X784 338 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 GAREM2Q75VX8 874 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 SV2BQ7L1I2 683 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ELMOD1Q8N336 334 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 MYCT1Q8N699 235 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 EFCAB3Q8N7B9 438 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 APPL2Q8NEU8 664 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 DHX58Q96C10 678 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF512Q96ME7 567 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 PGLYRP2Q96PD5 576 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 TMEM209Q96SK2 561 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 RTKNQ9BST9 563 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 TCHPQ9BT92 498 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 TNMDQ9H2S6 317 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 IKZF4Q9H2S9 585 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ST6GALNAC4Q9H4F1 302 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 RBM12Q9NTZ6 932 aaKnown RBP8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 GMEB2Q9UKD1 530 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 CFAP45Q9UL16 551 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 TBX20Q9UMR3 447 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 FREM2Q5SZK8 3169 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 ABCA7Q8IZY2 2146 aa8.59□□□□□ -1.03
CDC42BPA-210ENST00000462553 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 MYBPHLA2RUH7 354 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 DCDC2BA2VCK2 349 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 MTMR11A4FU01 709 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CHURC1-FNTBB4DL54 471 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 TISP43B9A030 160 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 H0YCG3 227 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ZNF263O14978 683 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CHADO15335 359 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 POLR2DO15514 142 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 HRO43593 1189 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 SOAT2O75908 522 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 PRAMEF12O95522 483 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 KRT18P05783 430 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ADRB2P07550 413 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CYP3A5P20815 502 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 SDHBP21912 280 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CTHP32929 405 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 PI4KAP42356 2102 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ME1P48163 572 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 FNTBP49356 437 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 NRLP54845 237 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 KRT85P78386 507 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 STRN3Q13033 797 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 DUSP4Q13115 394 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 GPR17Q13304 367 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CCINQ13939 588 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ENOX2Q16206 610 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CENPPQ6IPU0 288 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 SPEM1Q8N4L4 309 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CELF5Q8N6W0 485 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 GLIS3Q8NEA6 775 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 SECISBP2LQ93073 1101 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CHFRQ96EP1 664 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 MSANTD3Q96H12 275 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ZFYVE19Q96K21 471 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 TRIM9Q9C026 710 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CUEDC2Q9H467 287 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 ZHX3Q9H4I2 956 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 SLITRK6Q9H5Y7 841 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 OLFML3Q9NRN5 406 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 SEL1LQ9UBV2 794 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 KCNG1Q9UIX4 513 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 HPSEQ9Y251 543 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 TNRC6BQ9UPQ9 1833 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 CACNA1GO43497 2377 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 MYOFQ9NZM1 2061 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 LAMA5O15230 3695 aa8.58□□□□□ -1.04
CDC42BPA-210ENST00000462553 THADAQ6YHU6 1953 aa8.57□□□□□ -1.04
CDC42BPA-210ENST00000462553 MYO18AQ92614 2054 aaKnown RBP8.57□□□□□ -1.04
CDC42BPA-210ENST00000462553 PLXND1Q9Y4D7 1925 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms