RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 SGO2Q562F6 1265 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 TDRD12Q587J7 1177 aaKnown RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 ARHGAP17Q68EM7 881 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 ZNF280DQ6N043 979 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 KIAA1841Q6NSI8 718 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 DCP1BQ8IZD4 617 aaKnown RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 SLC4A11Q8NBS3 891 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 ZNF606Q8WXB4 792 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 PIK3R5Q8WYR1 880 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 RABGGTAQ92696 567 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 AGPAT1Q99943 283 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 GPR62Q9BZJ7 368 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 ELOVL4Q9GZR5 314 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 LHX5Q9H2C1 402 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 HAUS4Q9H6D7 363 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 NHEJ1Q9H9Q4 299 aaPredicted RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.36□□□□□ -0.59
RTF1-202ENST00000462276 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 ARHGAP20Q9P2F6 1191 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 CACNG4Q9UBN1 327 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 MSRAQ9UJ68 235 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 NOCTQ9UK39 431 aaKnown RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 MAFFQ9ULX9 164 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 SCN5AQ14524 2016 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 COL4A6Q14031 1691 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 FGF18O76093 207 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 C1RP00736 705 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 PDGFRBP09619 1106 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 CD19P15391 556 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 PTPN1P18031 435 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 EIF4A3P38919 411 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 RAP1GAPP47736 663 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 SLC8A3P57103 927 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 SNX16P57768 344 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 KRT83P78385 493 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 DSG1Q02413 1049 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 SPA17Q15506 151 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 SLC18A3Q16572 532 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 ASTE1Q2TB18 679 aaPredicted RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 E4F1Q66K89 784 aaPredicted RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 FAM171BQ6P995 826 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 LCLAT1Q6UWP7 414 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 ZNF571Q7Z3V5 609 aaPredicted RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 TDHQ8IZJ6 230 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 TMEM130Q8N3G9 435 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 B3GALNT2Q8NCR0 500 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 MYCBPAPQ8TBZ2 947 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 HASPINQ8TF76 798 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 C2orf15Q8WU43 125 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 DDX1Q92499 740 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 ELMO3Q96BJ8 720 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 TGS1Q96RS0 853 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 HNRNPABQ99729 332 aaKnown RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 SYT15Q9BQS2 421 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 SYT11Q9BT88 431 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 HERC2P3Q9BVR0 1158 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 MIS12Q9H081 205 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 EPN1Q9Y6I3 576 aaPredicted RBP11.35□□□□□ -0.59
RTF1-202ENST00000462276 RALGAPA2Q2PPJ7 1873 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 MICAL3Q7RTP6 2002 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 LTBP2Q14767 1821 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
RTF1-202ENST00000462276 LINC01553A4QN01 128 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 EIF3CLB5ME19 914 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 NT5C1B-RDH14C9J2C7 533 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 I3L4J1 428 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 O00370 1275 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 THAP12O43422 761 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 LCA5LO95447 670 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 URODP06132 367 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 SETSIPP0DME0 302 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 IGFBP6P24592 240 aaPredicted RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 LMO2P25791 158 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 TKTP29401 623 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 GLUD2P49448 558 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 ERVK-21P61565 698 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 CTXN3Q4LDR2 81 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 ZNF394Q53GI3 561 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 INTS6LQ5JSJ4 861 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 C4orf50Q6ZRC1 276 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 ACOT1Q86TX2 421 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 NOP9Q86U38 636 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 CEP57Q86XR8 500 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 TMEM139Q8IV31 216 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 TMEM35BQ8NCS4 154 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms