RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 SLC7A1P30825 629 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 HMGA2P52926 109 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
CALD1-213ENST00000462181 DARS2Q6PI48 645 aaKnown RBP6.87□□□□□ -1.31
CALD1-213ENST00000462181 ZNF783Q6ZMS7 281 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 CHST15Q7LFX5 561 aaPredicted RBP6.87□□□□□ -1.31
CALD1-213ENST00000462181 LNX2Q8N448 690 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 FAM156AQ8NDB6 213 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 BEND2Q8NDZ0 799 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 OR6B3Q8NGW1 331 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 IL31RAQ8NI17 732 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 SLC30A5Q8TAD4 765 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 KBTBD7Q8WVZ9 684 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 HEPHQ9BQS7 1158 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 AIFM2Q9BRQ8 373 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 ATP6V0A4Q9HBG4 840 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 PACSIN3Q9UKS6 424 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 TPCN1Q9ULQ1 816 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
CALD1-213ENST00000462181 A0A0B4J269 797 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 TPP1O14773 563 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 RHOBTB3O94955 611 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 ZBED1O96006 694 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 HMGB1P09429 215 aaKnown RBP6.86□□□□□ -1.31
CALD1-213ENST00000462181 NDUFV1P49821 464 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 MPP3Q13368 585 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 TUBB3Q13509 450 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 KIAA0753Q2KHM9 967 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 LONRF3Q496Y0 759 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 RNF220Q5VTB9 566 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 SWSAP1Q6NVH7 229 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 FAM9AQ8IZU1 332 aaPredicted RBP6.86□□□□□ -1.31
CALD1-213ENST00000462181 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 MOGAT1Q96PD6 335 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 TTYH3Q9C0H2 523 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 TOR3AQ9H497 397 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 KCTD5Q9NXV2 234 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 HESX1Q9UBX0 185 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 TMX2Q9Y320 296 aa6.86□□□□□ -1.31
CALD1-213ENST00000462181 EPN1Q9Y6I3 576 aaPredicted RBP6.86□□□□□ -1.31
CALD1-213ENST00000462181 MAST3O60307 1309 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 WDR33Q9C0J8 1336 aaKnown RBP6.85□□□□□ -1.31
CALD1-213ENST00000462181 A0A087X1B8 175 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 BTN3A1O00481 513 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 PEX1O43933 1283 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 TBC1D4O60343 1298 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 ESRRBO95718 433 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 HRGP04196 525 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 SRGNP10124 158 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 GCLCP48506 637 aaPredicted RBP6.85□□□□□ -1.31
CALD1-213ENST00000462181 TOB1P50616 345 aaPredicted RBP6.85□□□□□ -1.31
CALD1-213ENST00000462181 SEC24CP53992 1094 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 IQCB1Q15051 598 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 LAYNQ6UX15 382 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 Q6ZNX1 250 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 DGKHQ86XP1 1220 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 ANKS1AQ92625 1134 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 CHFRQ96EP1 664 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 SUCLG2Q96I99 432 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 CCDC136Q96JN2 1154 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 C8orf48Q96LL4 319 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 SLC46A1Q96NT5 459 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 SPATA5L1Q9BVQ7 753 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 C22orf23Q9BZE7 217 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 XPR1Q9UBH6 696 aa6.85□□□□□ -1.31
CALD1-213ENST00000462181 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.85□□□□□ -1.31
CALD1-213ENST00000462181 USP19O94966 1318 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 YY2O15391 372 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 SLC11A2P49281 568 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 ARFIP2P53365 341 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 UCP3P55916 312 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 FAM193AP78312 1265 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 BOP1Q14137 746 aaKnown RBP6.84□□□□□ -1.31
CALD1-213ENST00000462181 LMBRD2Q68DH5 695 aaPredicted RBP6.84□□□□□ -1.31
CALD1-213ENST00000462181 APOA5Q6Q788 366 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 SLC15A4Q8N697 577 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 B3GALNT2Q8NCR0 500 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 TOR1AIP2Q8NFQ8 470 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 LRTOMTQ8WZ04 291 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 IKZF4Q9H2S9 585 aa6.84□□□□□ -1.31
CALD1-213ENST00000462181 GOLIM4O00461 696 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 KIF3BO15066 747 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 MGEA5O60502 916 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 ATXN1LP0C7T5 689 aaKnown RBP6.83□□□□□ -1.32
CALD1-213ENST00000462181 PPP3CBP16298 524 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 EN2P19622 333 aaPredicted RBP6.83□□□□□ -1.32
CALD1-213ENST00000462181 MPLP40238 635 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 FOXI1Q12951 378 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 SLC13A2Q13183 592 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 RBM20Q5T481 1227 aaKnown RBP6.83□□□□□ -1.32
CALD1-213ENST00000462181 VWA1Q6PCB0 445 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 TMEM108Q6UXF1 575 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 TSHZ1Q6ZSZ6 1077 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 DNAJC5GQ8N7S2 189 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 LPIN2Q92539 896 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 TTC17Q96AE7 1141 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 FBXL20Q96IG2 436 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 OSBPL9Q96SU4 736 aa6.83□□□□□ -1.32
CALD1-213ENST00000462181 TPSD1Q9BZJ3 242 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms