RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TPRG1Q6ZUI0 275 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 DEPDC1BQ8WUY9 529 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 SCFD1Q8WVM8 642 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 LPIN3Q9BQK8 851 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 BLZF1Q9H2G9 400 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 KIAA1586Q9HCI6 787 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 LTB4R2Q9NPC1 389 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 HEBP1Q9NRV9 189 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 GDAP2Q9NXN4 497 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 TSC2P49815 1807 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 UBE4BO95155 1302 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 PVALEFA0A1B0GWK0 134 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 TGFB1I1O43294 461 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 TSPY1Q01534 308 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 VEPH1Q14D04 833 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 STXBP5Q5T5C0 1151 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 LMBRD2Q68DH5 695 aaPredicted RBP20.38■□□□□ 0.85
VARS-220ENST00000461874 C1orf210Q8IVY1 113 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 MFSD6LQ8IWD5 586 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 TMEM86AQ8N2M4 240 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 OR5B17Q8NGF7 314 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 FAM200AQ8TCP9 573 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 IRF7Q92985 503 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 E2F7Q96AV8 911 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 ANKRD36BP1Q96IX9 119 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 NELL2Q99435 816 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 ACBD6Q9BR61 282 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 ATXN3LQ9H3M9 355 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 TRPV5Q9NQA5 729 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 AGPAT3Q9NRZ7 376 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 TMLHEQ9NVH6 421 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 ABI2Q9NYB9 513 aaPredicted RBP20.38■□□□□ 0.85
VARS-220ENST00000461874 PCDHB5Q9Y5E4 795 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 VPS13AQ96RL7 3174 aa20.38■□□□□ 0.85
VARS-220ENST00000461874 NCANO14594 1321 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 PTPRJQ12913 1337 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 SHISA7A6NL88 538 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 HEPACAM2A8MVW5 462 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 GABRR2P28476 465 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 GDI1P31150 447 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 AFMP43652 599 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 SNRPFP62306 86 aaKnown RBP20.37■□□□□ 0.85
VARS-220ENST00000461874 CUL4BQ13620 913 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 DUOXA2Q1HG44 320 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 ZNF852Q6ZMS4 543 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 ASCL5Q7RTU5 278 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 TOP6BLQ8N6T0 577 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 SPATA18Q8TC71 538 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 RSPRY1Q96DX4 576 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 MKNK1Q9BUB5 465 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 BCO2Q9BYV7 579 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 DDX43Q9NXZ2 648 aaKnown RBP20.37■□□□□ 0.85
VARS-220ENST00000461874 SNX9Q9Y5X1 595 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 COL4A3Q01955 1670 aa20.37■□□□□ 0.85
VARS-220ENST00000461874 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.36■□□□□ 0.85
VARS-220ENST00000461874 PRR23AA6NEV1 266 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 TNNC2P02585 160 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 SLFN14P0C7P3 912 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 SNRNP35Q16560 246 aaKnown RBP20.36■□□□□ 0.85
VARS-220ENST00000461874 NFE2Q16621 373 aaPredicted RBP20.36■□□□□ 0.85
VARS-220ENST00000461874 BMT2Q1RMZ1 405 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 ARID3BQ8IVW6 561 aaPredicted RBP20.36■□□□□ 0.85
VARS-220ENST00000461874 NELFCDQ8IXH7 590 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 GIPC2Q8TF65 315 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 NKD2Q969F2 451 aaPredicted RBP20.36■□□□□ 0.85
VARS-220ENST00000461874 CLDN23Q96B33 292 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 IL21Q9HBE4 155 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 SLC39A2Q9NP94 309 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 SERTAD1Q9UHV2 236 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 R3HCC1Q9Y3T6 440 aaKnown RBP20.36■□□□□ 0.85
VARS-220ENST00000461874 CACNA1IQ9P0X4 2223 aa20.36■□□□□ 0.85
VARS-220ENST00000461874 FAM186AA6NE01 2351 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 GABRDO14764 452 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 ZNF263O14978 683 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 CLIC2O15247 247 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 TARSP26639 723 aaKnown RBP20.35■□□□□ 0.85
VARS-220ENST00000461874 MYL7Q01449 175 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 MYO1EQ12965 1108 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 TAF12Q16514 161 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 SOWAHAQ2M3V2 549 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 ARHGAP15Q53QZ3 475 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 INTS6LQ5JSJ4 861 aaKnown RBP20.35■□□□□ 0.85
VARS-220ENST00000461874 GPR158Q5T848 1215 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 HS2ST1Q7LGA3 356 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 LIMS2Q7Z4I7 341 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 OSTM1Q86WC4 334 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 WDR49Q8IV35 697 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 GRAMD1CQ8IYS0 662 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 CEP57L1Q8IYX8 460 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 RDH13Q8NBN7 331 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 LEO1Q8WVC0 666 aaPredicted RBP20.35■□□□□ 0.85
VARS-220ENST00000461874 HPDLQ96IR7 371 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 PKMYT1Q99640 499 aa20.35■□□□□ 0.85
VARS-220ENST00000461874 MRPS17Q9Y2R5 130 aaKnown RBP20.35■□□□□ 0.85
VARS-220ENST00000461874 ARNTLO00327 626 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 MAN2B1O00754 1011 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 ACTN4O43707 911 aaKnown RBP20.34■□□□□ 0.85
VARS-220ENST00000461874 PRPF40AO75400 957 aaKnown RBP20.34■□□□□ 0.85
VARS-220ENST00000461874 SP9P0CG40 484 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 ACAT1P24752 427 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms