RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 PRR13Q9NZ81 148 aa6.13□□□□□ -1.43
SPTA1-202ENST00000461624 IGSF9Q9P2J2 1179 aa6.13□□□□□ -1.43
SPTA1-202ENST00000461624 TNNQ9UQP3 1299 aa6.13□□□□□ -1.43
SPTA1-202ENST00000461624 SIT1Q9Y3P8 196 aa6.13□□□□□ -1.43
SPTA1-202ENST00000461624 MRVI1Q9Y6F6 885 aa6.13□□□□□ -1.43
SPTA1-202ENST00000461624 MYH15Q9Y2K3 1946 aa6.13□□□□□ -1.43
SPTA1-202ENST00000461624 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 TMEM82A0PJX8 343 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 MBLAC1A4D2B0 266 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 TBC1D4O60343 1298 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 NMT2O60551 498 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 EIF3JO75822 258 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 GGPS1O95749 300 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 EFEMP2O95967 443 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 ATP2B1P20020 1258 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 CDK11BP21127 795 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 SLC7A5Q01650 507 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 SLFN5Q08AF3 891 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 AUHQ13825 339 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 TCEAL1Q15170 157 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 GNPTABQ3T906 1256 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 ATAT1Q5SQI0 421 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 CEP128Q6ZU80 1094 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 OTOP3Q7RTS5 596 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 TMC3Q7Z5M5 1100 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 GPR149Q86SP6 731 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 TRMT2AQ8IZ69 625 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 MRPL43Q8N983 215 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 NSUN6Q8TEA1 469 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 SLC22A17Q8WUG5 538 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 RSAD2Q8WXG1 361 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 DOCK6Q96HP0 2047 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 SIGLEC10Q96LC7 697 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 SPATA33Q96N06 139 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 DNAJC2Q99543 621 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 GPR20Q99678 358 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 SGPP1Q9BX95 441 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 ZCCHC4Q9H5U6 513 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 PRMT8Q9NR22 394 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 PAG1Q9NWQ8 432 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 ACTR10Q9NZ32 417 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 MBD1Q9UIS9 605 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 DBR1Q9UK59 544 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 ISY1Q9ULR0 285 aaKnown RBP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 CA14Q9ULX7 337 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.12□□□□□ -1.43
SPTA1-202ENST00000461624 TELO2Q9Y4R8 837 aa6.12□□□□□ -1.43
SPTA1-202ENST00000461624 LRRK2Q5S007 2527 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 NOTCH2Q04721 2471 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 MYH6P13533 1939 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 TMEM8BA6NDV4 472 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SMAD7O15105 426 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SIGLEC6O43699 453 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 MGEA5O60502 916 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 STK10O94804 968 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 STAG3L1P0CL83 205 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 NAT2P11245 290 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 TRIM27P14373 513 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 PNLIPP16233 465 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 EPCAMP16422 314 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SARSP49591 514 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 GALK1P51570 392 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 LIMK1P53667 647 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 RARSP54136 660 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 STARD6P59095 220 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SRSF3P84103 164 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 TFAP4Q01664 338 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 GHRHRQ02643 423 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 MARCH8Q5T0T0 291 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 FAM102BQ5T8I3 360 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 TDRD10Q5VZ19 366 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 TAF2Q6P1X5 1199 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 LRRC55Q6ZSA7 311 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 CCDC149Q6ZUS6 474 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 THNSL1Q8IYQ7 743 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 ZNF444Q8N0Y2 327 aaPredicted RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SLC44A3Q8N4M1 653 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 ATRIPQ8WXE1 791 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 DDX1Q92499 740 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SECISBP2LQ93073 1101 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 FCRL2Q96LA5 508 aaPredicted RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 C20orf173Q96LM9 149 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 KCNC2Q96PR1 638 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 RMDN3Q96TC7 470 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 FTHL17Q9BXU8 183 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 ENTPD7Q9NQZ7 604 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SLC2A4RGQ9NR83 387 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SEMA4GQ9NTN9 838 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 TYW1Q9NV66 732 aaKnown RBP6.11□□□□□ -1.43
SPTA1-202ENST00000461624 EPS15L1Q9UBC2 864 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 PNMA2Q9UL42 364 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 IRAK3Q9Y616 596 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 SQORQ9Y6N5 450 aa6.11□□□□□ -1.43
SPTA1-202ENST00000461624 CCDC171Q6TFL3 1326 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 IGSF9BQ9UPX0 1349 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 ABCA12Q86UK0 2595 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 TBKBP1A7MCY6 615 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms