RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 NTHL1P78549 312 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 PAK1Q13153 545 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 NFE2Q16621 373 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 MGAT5BQ3V5L5 792 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 PABPC1LQ4VXU2 614 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 DCAF17Q5H9S7 520 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 INTS6LQ5JSJ4 861 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 C1orf220Q5T0J3 134 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 TCERG1LQ5VWI1 586 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 IQCEQ6IPM2 695 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZC3H3Q8IXZ2 948 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZDHHC14Q8IZN3 488 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 CCDC150Q8NCX0 1101 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 OR6B3Q8NGW1 331 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 SPPL2BQ8TCT7 592 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 CEP63Q96MT8 703 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 IMPG2Q9BZV3 1241 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 VRTNQ9H8Y1 702 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 HCFC1R1Q9NWW0 138 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 ABI2Q9NYB9 513 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 DNMT3BQ9UBC3 853 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 YIPF1Q9Y548 306 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 PCDHB5Q9Y5E4 795 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 DOCK6Q96HP0 2047 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 GABRDO14764 452 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 DCXO43602 365 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 TACC1O75410 805 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 FGFR1OPO95684 399 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 RHOP08100 348 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 PDGFRBP09619 1106 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 ALADP13716 330 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 GNL1P36915 607 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 CDR1P51861 262 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 PPP3CAQ08209 521 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 CYP4A22Q5TCH4 519 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 KRT39Q6A163 491 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 TTI2Q6NXR4 508 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 SCARA5Q6ZMJ2 495 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 LIMS2Q7Z4I7 341 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 FAM200AQ8TCP9 573 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 KBTBD7Q8WVZ9 684 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 TAF4BQ92750 862 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 SEPT5Q99719 369 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 SYT15Q9BQS2 421 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 CORO1BQ9BR76 489 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 MRPL45Q9BRJ2 306 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 XYLT2Q9H1B5 865 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 METTL14Q9HCE5 456 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 HSFX1Q9UBD0 423 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 MUTYHQ9UIF7 546 aa11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-213ENST00000461577 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 A8MXQ7 604 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 PI4K2BG5E9Z4 385 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 ZNF197O14709 1029 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 HCRTO43612 131 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 SOAT2O75908 522 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 LMO2P25791 158 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 MXI1P50539 228 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 VEPH1Q14D04 833 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 TAF12Q16514 161 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 FRMD5Q7Z6J6 570 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 ITIH5Q86UX2 942 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 SPATA2LQ8IUW3 424 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 TTC9BQ8N6N2 239 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 GPT2Q8TD30 523 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.66e-11■■■□□ 18.6
TRAPPC12-213ENST00000461577 ELMO3Q96BJ8 720 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 MYADMQ96S97 322 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.65e-13■■■■■ 311.6
TRAPPC12-213ENST00000461577 ASAH2Q9NR71 780 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 TMLHEQ9NVH6 421 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 CEP72Q9P209 647 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 MAGEC2Q9UBF1 373 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 CDH7Q9ULB5 785 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 ASB3Q9Y575 518 aa11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 ZFP37Q9Y6Q3 630 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-213ENST00000461577 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms