RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 PCDHGA9Q9Y5G4 932 aaKnown RBP4.94□□□□□ -1.62
COL21A1-205ENST00000461489 PCDHGA8Q9Y5G5 932 aa4.94□□□□□ -1.62
COL21A1-205ENST00000461489 PCDHGA7Q9Y5G6 932 aa4.94□□□□□ -1.62
COL21A1-205ENST00000461489 PCDHGA6Q9Y5G7 932 aa4.94□□□□□ -1.62
COL21A1-205ENST00000461489 PCDHGA3Q9Y5H0 932 aa4.94□□□□□ -1.62
COL21A1-205ENST00000461489 NT5C1B-RDH14C9J2C7 533 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 JTBO76095 146 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 FAM163BP0C2L3 166 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 CERS1P27544 350 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 MPGP29372 298 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 TEDDM1Q5T9Z0 273 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 SYDE2Q5VT97 1194 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 ZNF66Q6ZN08 573 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 SLC29A4Q7RTT9 530 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 NEK8Q86SG6 692 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 FANCBQ8NB91 859 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 BHMT2Q9H2M3 363 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 TMX1Q9H3N1 280 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 RAD54BQ9Y620 910 aa4.93□□□□□ -1.62
COL21A1-205ENST00000461489 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 SMIM22K7EJ46 135 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 KIF20AO95235 890 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 LATS1O95835 1130 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 CYP2D6P10635 497 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 RARBP10826 455 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 JUPP14923 745 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 PCSK6P29122 969 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 PHKA1P46020 1223 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 PIK3CGP48736 1102 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 ALDH9A1P49189 494 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 PROSER3Q2NL68 480 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 ZNF618Q5T7W0 954 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 VPS53Q5VIR6 699 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 MORN5Q5VZ52 161 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 YTHDF3Q7Z739 585 aaKnown RBP4.92□□□□□ -1.62
COL21A1-205ENST00000461489 DENND1AQ8TEH3 1009 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 ZBTB9Q96C00 473 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 GPR35Q9HC97 309 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 SERPINB13Q9UIV8 391 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 TRHDEQ9UKU6 1024 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 AGAP1Q9UPQ3 857 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 ZNF521Q96K83 1311 aa4.92□□□□□ -1.62
COL21A1-205ENST00000461489 LRRC14BA6NHZ5 514 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 QSOX1O00391 747 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 PDHA1P08559 390 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 GCLCP48506 637 aaPredicted RBP4.91□□□□□ -1.62
COL21A1-205ENST00000461489 DSC2Q02487 901 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 PCBP2Q15366 365 aaKnown RBP eCLIP4.91□□□□□ -1.62
COL21A1-205ENST00000461489 PRAMEF17Q5VTA0 474 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 SLC9A4Q6AI14 798 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 ZNF804AQ7Z570 1209 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 PNMA8AQ86V59 439 aaPredicted RBP4.91□□□□□ -1.62
COL21A1-205ENST00000461489 C3orf20Q8ND61 904 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 TBC1D5Q92609 795 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 SH2D3AQ9BRG2 576 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 C1orf43Q9BWL3 253 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 TINAGL1Q9GZM7 467 aaPredicted RBP4.91□□□□□ -1.62
COL21A1-205ENST00000461489 BTBD3Q9Y2F9 522 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 TBC1D30Q9Y2I9 924 aa4.91□□□□□ -1.62
COL21A1-205ENST00000461489 SHTN1A0MZ66 631 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 PRSS29PA6NIE9 313 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 PPP6CO00743 305 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 PPM1DO15297 605 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 GNAI2P04899 355 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 FTH1P19P0C7X4 201 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 PRDX5P30044 214 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 ITKQ08881 620 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 KIF22Q14807 665 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 AARS2Q5JTZ9 985 aaKnown RBP4.9□□□□□ -1.63
COL21A1-205ENST00000461489 SLC18B1Q6NT16 456 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 ANKRD16Q6P6B7 361 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 FAM109AQ8N4B1 249 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 REPS1Q96D71 796 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 QTRT1Q9BXR0 403 aaKnown RBP4.9□□□□□ -1.63
COL21A1-205ENST00000461489 SERHLQ9NQF3 203 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 POLHQ9Y253 713 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 ATP8A1Q9Y2Q0 1164 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 PCDHA3Q9Y5H8 950 aa4.9□□□□□ -1.63
COL21A1-205ENST00000461489 TISP43B9A030 160 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 H0YIZ8 118 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 M0QYG6 137 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 ARIH2O95376 493 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 NHLRC4P0CG21 123 aaPredicted RBP4.89□□□□□ -1.63
COL21A1-205ENST00000461489 CYP2C18P33260 490 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 ADKP55263 362 aaKnown RBP4.89□□□□□ -1.63
COL21A1-205ENST00000461489 KRT85P78386 507 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 SUPT20HL1Q3ZLR7 823 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 USP37Q86T82 979 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 TNPO1Q92973 898 aaKnown RBP4.89□□□□□ -1.63
COL21A1-205ENST00000461489 MTMR8Q96EF0 704 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
COL21A1-205ENST00000461489 NELL2Q99435 816 aa4.89□□□□□ -1.63
COL21A1-205ENST00000461489 CCDC8Q9H0W5 538 aaPredicted RBP4.89□□□□□ -1.63
COL21A1-205ENST00000461489 FZD9O00144 591 aa4.88□□□□□ -1.63
COL21A1-205ENST00000461489 ZNF213O14771 459 aa4.88□□□□□ -1.63
COL21A1-205ENST00000461489 MOSPD3O75425 235 aa4.88□□□□□ -1.63
COL21A1-205ENST00000461489 TOB1P50616 345 aaPredicted RBP4.88□□□□□ -1.63
COL21A1-205ENST00000461489 FXR1P51114 621 aaKnown RBP eCLIP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms