RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 L1RE1Q9UN81 338 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL5A3-202ENST00000461214 WARSP23381 471 aaKnown RBP15.39■□□□□ 0.05
COL5A3-202ENST00000461214 GLUD2P49448 558 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 CREMQ03060 361 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 YWHAHQ04917 246 aaPredicted RBP15.39■□□□□ 0.05
COL5A3-202ENST00000461214 PTPROQ16827 1216 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 SOWAHAQ2M3V2 549 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 USP41Q3LFD5 358 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 TCEAL5Q5H9L2 206 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 FAM171A1Q5VUB5 890 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 METTL23Q86XA0 190 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 FMNL3Q8IVF7 1028 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 PDCL2Q8N4E4 241 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 TATDN2Q93075 761 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 PBXIP1Q96AQ6 731 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 MMS19Q96T76 1030 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 TTPALQ9BTX7 342 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 VN1R3Q9BXE9 311 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 TTYH3Q9C0H2 523 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 SMYD3Q9H7B4 428 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 CLDND1Q9NY35 253 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 PUF60Q9UHX1 559 aaKnown RBP15.39■□□□□ 0.05
COL5A3-202ENST00000461214 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 POLIQ9UNA4 740 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 SSX2IPQ9Y2D8 614 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 FHOD1Q9Y613 1164 aa15.39■□□□□ 0.05
COL5A3-202ENST00000461214 A0A1W2PQJ5 194 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 H3BNC9 293 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 I3L4J1 428 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 GABRDO14764 452 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 NOL4O94818 638 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 URODP06132 367 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 TKTP29401 623 aaKnown RBP15.38■□□□□ 0.05
COL5A3-202ENST00000461214 LHX1P48742 406 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 KLK7P49862 253 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 TCF15Q12870 199 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 LRMPQ12912 555 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
COL5A3-202ENST00000461214 OVOS1Q6IE37 1185 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 ZNF280DQ6N043 979 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 UNC93AQ86WB7 457 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
COL5A3-202ENST00000461214 UBR7Q8N806 425 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 KBTBD7Q8WVZ9 684 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 PIK3R5Q8WYR1 880 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 SHC3Q92529 594 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 MRPL38Q96DV4 380 aaKnown RBP15.38■□□□□ 0.05
COL5A3-202ENST00000461214 ARID3AQ99856 593 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 NAA15Q9BXJ9 866 aaKnown RBP15.38■□□□□ 0.05
COL5A3-202ENST00000461214 LMAN2LQ9H0V9 348 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 ZBP1Q9H171 429 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 UBE2TQ9NPD8 197 aaPredicted RBP15.38■□□□□ 0.05
COL5A3-202ENST00000461214 CHST7Q9NS84 486 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 DNAJC12Q9UKB3 198 aa15.38■□□□□ 0.05
COL5A3-202ENST00000461214 H7C4K7 107 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 EPHB6O15197 1021 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 OAZ2O95190 189 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 TPM1P09493 284 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 IGFBP6P24592 240 aaPredicted RBP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 POLR2FP61218 127 aaKnown RBP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 DSG1Q02413 1049 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 VARS2Q5ST30 1063 aaKnown RBP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 WSCD1Q658N2 575 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 CACNA2D4Q7Z3S7 1137 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 PABPC5Q96DU9 382 aaKnown RBP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 KREMEN1Q96MU8 473 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 SDCBP2Q9H190 292 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 SNX25Q9H3E2 840 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 TLR9Q9NR96 1032 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 BARX2Q9UMQ3 279 aaPredicted RBP15.37■□□□□ 0.05
COL5A3-202ENST00000461214 CNTN6Q9UQ52 1028 aa15.37■□□□□ 0.05
COL5A3-202ENST00000461214 TMEM221A6NGB7 291 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 F8VZ95 297 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 M0R296 226 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 CILPO75339 1184 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 ADCY5O95622 1261 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 GYPCP04921 128 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 CTSAP10619 480 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 PCSK1P29120 753 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 RAP1GAPP47736 663 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 JAM2P57087 298 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 APBA1Q02410 837 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 RAPGEF1Q13905 1077 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 MRPL58Q14197 206 aaKnown RBP15.36■□□□□ 0.05
COL5A3-202ENST00000461214 RTP2Q5QGT7 225 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 KIAA1841Q6NSI8 718 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 GJB7Q6PEY0 223 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 RRAGAQ7L523 313 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 VPS52Q8N1B4 723 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 THEM5Q8N1Q8 247 aa15.36■□□□□ 0.05
COL5A3-202ENST00000461214 ANP32BQ92688 251 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms