RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 LMBRD2Q68DH5 695 aaPredicted RBP14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ANKRD40Q6AI12 368 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 KLHL10Q6JEL2 608 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PDZD4Q76G19 769 aaPredicted RBP14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TRAPPC11Q7Z392 1133 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TMEM105Q8N8V8 129 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 LEMD2Q8NC56 503 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ITFG1Q8TB96 612 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CORO1BQ9BR76 489 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 MKNK1Q9BUB5 465 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 SLC2A4RGQ9NR83 387 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 HCFC1R1Q9NWW0 138 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CA14Q9ULX7 337 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 INSL5Q9Y5Q6 135 aa14.23□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PPP1R3GB7ZBB8 358 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 H0Y858 1186 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CYB561D2O14569 222 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PPEF2O14830 753 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 IKBKBO14920 756 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 HUS1O60921 280 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 MICAL2O94851 1124 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 VAMP7P51809 220 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 BFSP1Q12934 665 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 OVOS1Q6IE37 1185 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 FOXR2Q6PJQ5 311 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PARM1Q6UWI2 310 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TMEM130Q8N3G9 435 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 MLKLQ8NB16 471 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 OR5B17Q8NGF7 314 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 GPR152Q8TDT2 470 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 NELFBQ8WX92 580 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ARHGEF3Q9NR81 526 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 KMT2EQ8IZD2 1858 aa14.22□□□□□ -0.13
RAB11FIP3-207ENST00000461009 STX10O60499 249 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 AKAP3O75969 853 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CYP11A1P05108 521 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 BMP6P22004 513 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ATICP31939 592 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ALDH1A3P47895 512 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 EPHB3P54753 998 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CLDN10P78369 228 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TWF1Q12792 350 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PAK1Q13153 545 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 BIRC3Q13489 604 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PHLDB3Q6NSJ2 640 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 NPAS3Q8IXF0 933 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ING5Q8WYH8 240 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ZNF516Q92618 1163 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 FGF14Q92915 247 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 MCRS1Q96EZ8 462 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 HPDLQ96IR7 371 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 CEP63Q96MT8 703 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 ASAH2Q9NR71 780 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 GDAP2Q9NXN4 497 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 SIX4Q9UIU6 781 aa14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 TIMM13Q9Y5L4 95 aaPredicted RBP14.21□□□□□ -0.13
RAB11FIP3-207ENST00000461009 PTPRJQ12913 1337 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 LRRIQ3A6PVS8 624 aaPredicted RBP14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SPTLC1O15269 473 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SLC16A3O15427 465 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ECI2O75521 394 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SEC24AO95486 1093 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 NPR3P17342 541 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PTMSP20962 102 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GPC5P78333 572 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GPR17Q13304 367 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CWF19L1Q69YN2 538 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 RNF19BQ6ZMZ0 732 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DPH6Q7L8W6 267 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FILIP1Q7Z7B0 1213 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TMEM86AQ8N2M4 240 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DTWD2Q8NBA8 298 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CXorf38Q8TB03 319 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GPT2Q8TD30 523 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PLEKHO2Q8TD55 490 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SYAP1Q96A49 352 aaPredicted RBP14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GPR88Q9GZN0 384 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TBC1D17Q9HA65 648 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 METTL14Q9HCE5 456 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CTNND2Q9UQB3 1225 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SIT1Q9Y3P8 196 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ZDBF2Q9HCK1 2354 aa14.2□□□□□ -0.14
RAB11FIP3-207ENST00000461009 KRBA1A5PL33 1030 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TRIM49BA6NDI0 452 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FGF19O95750 216 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CST3P01034 146 aaPredicted RBP14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 C4BPAP04003 597 aaKnown RBP14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FAM163BP0C2L3 166 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GTF2H1P32780 548 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PMS1P54277 932 aaKnown RBP14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PRKCQQ04759 706 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SMARCB1Q12824 385 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ITIH5Q86UX2 942 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ZC3H3Q8IXZ2 948 aaKnown RBP14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CCDC105Q8IYK2 499 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms