RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 PGLYRP2Q96PD5 576 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 PKMYT1Q99640 499 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 ARID3AQ99856 593 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 LPIN3Q9BQK8 851 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 CRACR2AQ9BSW2 395 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 APOL5Q9BWW9 433 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 BCO2Q9BYV7 579 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 IMPG2Q9BZV3 1241 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 NIF3L1Q9GZT8 377 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 CBX8Q9HC52 389 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 C5orf42Q9H799 3197 aa14.98□□□□□ -0.01
HDLBP-229ENST00000460826 TCF20Q9UGU0 1960 aaKnown RBP14.98□□□□□ -0.01
HDLBP-229ENST00000460826 NOTCH4Q99466 2003 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 MTMR11A4FU01 709 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 ATP2C2O75185 946 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 RFPL2O75678 378 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 C1RP00736 705 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 GNL1P36915 607 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 PSMC1P62191 440 aaKnown RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 VWA3BQ502W6 1294 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 INTS6LQ5JSJ4 861 aaKnown RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 EHBP1Q8NDI1 1231 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 SYT15Q9BQS2 421 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 ACBD6Q9BR61 282 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 OXCT2Q9BYC2 517 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 INTS2Q9H0H0 1204 aaKnown RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 CRISPLD1Q9H336 500 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 SNX25Q9H3E2 840 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 NDST4Q9H3R1 872 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 DPEP3Q9H4B8 488 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 DZANK1Q9NVP4 752 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 HMGXB4Q9UGU5 601 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 AFF4Q9UHB7 1163 aaKnown RBP14.97□□□□□ -0.01
HDLBP-229ENST00000460826 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 COG5Q9UP83 839 aa14.97□□□□□ -0.01
HDLBP-229ENST00000460826 MYBPHLA2RUH7 354 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 SRGAP2BP0DMP2 458 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 P4HA1P13674 534 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 ATF2P15336 505 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 TSPY1Q01534 308 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 APBA1Q02410 837 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 ORC1Q13415 861 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 WDR44Q5JSH3 913 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 RARS2Q5T160 578 aaKnown RBP14.96□□□□□ -0.01
HDLBP-229ENST00000460826 TPGS2Q68CL5 300 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 LRSAM1Q6UWE0 723 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 ARHGEF19Q8IW93 802 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 TTC9BQ8N6N2 239 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 CCDC150Q8NCX0 1101 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 HDAC7Q8WUI4 952 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 KAT5Q92993 513 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 TWNKQ96RR1 684 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 S1PR5Q9H228 398 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 VPS16Q9H269 839 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 PLEKHA4Q9H4M7 779 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 CRTAC1Q9NQ79 661 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 GCNT4Q9P109 453 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 THEGQ9P2T0 379 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 LIMA1Q9UHB6 759 aaKnown RBP14.96□□□□□ -0.01
HDLBP-229ENST00000460826 GTF3C4Q9UKN8 822 aa14.96□□□□□ -0.01
HDLBP-229ENST00000460826 UNC80Q8N2C7 3258 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 DENND4AQ7Z401 1863 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 SMTNL1A8MU46 457 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 A8MXQ7 604 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 ZMYND10O75800 440 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 C8AP07357 584 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 CD58P19256 250 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 SLC9A1P19634 815 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 PCSK1P29120 753 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 NDST1P52848 882 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 COPB1P53618 953 aaKnown RBP14.95□□□□□ -0.02
HDLBP-229ENST00000460826 INCA1Q0VD86 236 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 CETN1Q12798 172 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 TMC5Q6UXY8 1006 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 APTXQ7Z2E3 356 aaKnown RBP14.95□□□□□ -0.02
HDLBP-229ENST00000460826 LUZP1Q86V48 1076 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 TCEAL8Q8IYN2 117 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 DCP1BQ8IZD4 617 aaKnown RBP14.95□□□□□ -0.02
HDLBP-229ENST00000460826 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.95□□□□□ -0.02
HDLBP-229ENST00000460826 SLC7A14Q8TBB6 771 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 ZNF707Q96C28 371 aaPredicted RBP14.95□□□□□ -0.02
HDLBP-229ENST00000460826 NT5C1BQ96P26 610 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 CYP3A43Q9HB55 503 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 CYP4F11Q9HBI6 524 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 CD207Q9UJ71 328 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 CDH9Q9ULB4 789 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 SLC27A5Q9Y2P5 690 aa14.95□□□□□ -0.02
HDLBP-229ENST00000460826 GREB1Q4ZG55 1949 aa14.94□□□□□ -0.02
HDLBP-229ENST00000460826 GRXCR2A6NFK2 248 aa14.94□□□□□ -0.02
HDLBP-229ENST00000460826 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
HDLBP-229ENST00000460826 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
HDLBP-229ENST00000460826 SOAT2O75908 522 aa14.94□□□□□ -0.02
HDLBP-229ENST00000460826 PTPN1P18031 435 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms