RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 USP35Q9P2H5 1018 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 TUBD1Q9UJT1 453 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 SHTN1A0MZ66 631 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 E9PLN8 166 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 F2RL2O00254 374 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 SLC16A3O15427 465 aaKnown RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 KCNAB3O43448 404 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 TUBB4AP04350 444 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 MMP13P45452 471 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 ADKP55263 362 aaKnown RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 EEFSECP57772 596 aaKnown RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 TFF2Q03403 129 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 IL10RAQ13651 578 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 KHDC1Q4VXA5 237 aaKnown RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 PXDC1Q5TGL8 231 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 SYDE2Q5VT97 1194 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 PRAMEF17Q5VTA0 474 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 EFCAB2Q5VUJ9 269 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 ICE2Q659A1 982 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 TAF2Q6P1X5 1199 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 LAYNQ6UX15 382 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF782Q6ZMW2 699 aaPredicted RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 YTHDF3Q7Z739 585 aaKnown RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 PNMA8AQ86V59 439 aaPredicted RBP3.47□□□□□ -1.85
SYPL1-203ENST00000460770 KLHDC4Q8TBB5 520 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 COA7Q96BR5 231 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 HMCESQ96FZ2 354 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 LRIG1Q96JA1 1093 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 VKORC1Q9BQB6 163 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 ZDHHC8Q9ULC8 765 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 LIMCH1Q9UPQ0 1083 aa3.47□□□□□ -1.85
SYPL1-203ENST00000460770 MOSPD3O75425 235 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 LATS1O95835 1130 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 MT-CO1P00395 513 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 CBSLP0DN79 551 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 MYBL2P10244 700 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 CYP2D6P10635 497 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 LPOP22079 712 aaPredicted RBP3.46□□□□□ -1.86
SYPL1-203ENST00000460770 CBSP35520 551 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 IARSP41252 1262 aaKnown RBP3.46□□□□□ -1.86
SYPL1-203ENST00000460770 GCLCP48506 637 aaPredicted RBP3.46□□□□□ -1.86
SYPL1-203ENST00000460770 LAMB3Q13751 1172 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 KIF22Q14807 665 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 ETFDHQ16134 617 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 INAVAQ3KP66 663 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 C3orf36Q3SXR2 165 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 SLC18B1Q6NT16 456 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 DTX2Q86UW9 622 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 MIER2Q8N344 545 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 CPA6Q8N4T0 437 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 KAT5Q92993 513 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 ZBTB9Q96C00 473 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 FAM167AQ96KS9 214 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 MOGAT1Q96PD6 335 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 VRK1Q99986 396 aaPredicted RBP3.46□□□□□ -1.86
SYPL1-203ENST00000460770 SLAMF7Q9NQ25 335 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 ANLNQ9NQW6 1124 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 TUBA8Q9NY65 449 aaPredicted RBP3.46□□□□□ -1.86
SYPL1-203ENST00000460770 ETAA1Q9NY74 926 aa3.46□□□□□ -1.86
SYPL1-203ENST00000460770 FEZ2Q9UHY8 353 aaPredicted RBP3.46□□□□□ -1.86
SYPL1-203ENST00000460770 POLR2AP24928 1970 aaKnown RBP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 MYMKA6NI61 221 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 SMIM22K7EJ46 135 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 PPEF2O14830 753 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 NPSP0C0P6 89 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 CCND1P24385 295 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 EDNRBP24530 442 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 CYP2C18P33260 490 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 FXR1P51114 621 aaKnown RBP eCLIP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 POLGP54098 1239 aaPredicted RBP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 HOXA4Q00056 320 aaPredicted RBP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 TCF15Q12870 199 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 SNAPC2Q13487 334 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 PROSER3Q2NL68 480 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 TBC1D25Q3MII6 688 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 CERKLQ49MI3 558 aaPredicted RBP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 AMOTQ4VCS5 1084 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 PCID2Q5JVF3 399 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 FAM160B1Q5W0V3 765 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 MTHFD1LQ6UB35 978 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 FAM109AQ8N4B1 249 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 RP9Q8TA86 221 aaKnown RBP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 TEKT5Q96M29 485 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 TMEM79Q9BSE2 394 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 BRIP1Q9BX63 1249 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 TINAGL1Q9GZM7 467 aaPredicted RBP3.45□□□□□ -1.86
SYPL1-203ENST00000460770 SPC25Q9HBM1 224 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 SERGEFQ9UGK8 458 aa3.45□□□□□ -1.86
SYPL1-203ENST00000460770 NT5C1B-RDH14C9J2C7 533 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 PRRT4C9JH25 899 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 MYO1FO00160 1098 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 TP73O15350 636 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 VPS4BO75351 444 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 DNAJB5O75953 348 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 DLDP09622 509 aaKnown RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 ATXN1LP0C7T5 689 aaKnown RBP3.44□□□□□ -1.86
SYPL1-203ENST00000460770 MPGP29372 298 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 PRDX5P30044 214 aa3.44□□□□□ -1.86
SYPL1-203ENST00000460770 PPIFP30405 207 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms