RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 FAM124BQ9H5Z6 455 aaPredicted RBP24.04■■□□□ 1.44
C9orf3-209ENST00000460573 CYP3A43Q9HB55 503 aa24.04■■□□□ 1.44
C9orf3-209ENST00000460573 GTPBP10A4D1E9 387 aaKnown RBP24.03■■□□□ 1.44
C9orf3-209ENST00000460573 TGM5O43548 720 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 CDK11BP21127 795 aaKnown RBP24.03■■□□□ 1.44
C9orf3-209ENST00000460573 PCSK1P29120 753 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 ROR1Q01973 937 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 SMARCB1Q12824 385 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 IQCB1Q15051 598 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 RSPO2Q6UXX9 243 aaPredicted RBP24.03■■□□□ 1.44
C9orf3-209ENST00000460573 PALB2Q86YC2 1186 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 DCP1BQ8IZD4 617 aaKnown RBP24.03■■□□□ 1.44
C9orf3-209ENST00000460573 EHBP1Q8NDI1 1231 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 KHSRPQ92945 711 aaKnown RBP eCLIP24.03■■□□□ 1.446e-6■■■■□ 21
C9orf3-209ENST00000460573 SNX25Q9H3E2 840 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 PLEKHA4Q9H4M7 779 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 DZANK1Q9NVP4 752 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 DDX43Q9NXZ2 648 aaKnown RBP24.03■■□□□ 1.44
C9orf3-209ENST00000460573 POLIQ9UNA4 740 aa24.03■■□□□ 1.44
C9orf3-209ENST00000460573 LRRC10BA6NIK2 292 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 ADAM12O43184 909 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 DCXO43602 365 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 ABLIM3O94929 683 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 ZNF18P17022 549 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 GNL1P36915 607 aaPredicted RBP24.02■■□□□ 1.44
C9orf3-209ENST00000460573 GPR17Q13304 367 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 SPOPLQ6IQ16 392 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 RTL10Q7L3V2 364 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 TTC39CQ8N584 583 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 SMRP1Q8NCR6 262 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 KBTBD7Q8WVZ9 684 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 MSLNLQ96KJ4 702 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 RTP3Q9BQQ7 232 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 LRFN3Q9BTN0 628 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 BCO2Q9BYV7 579 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 ZCWPW1Q9H0M4 648 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 APOBEC3GQ9HC16 384 aaKnown RBP24.02■■□□□ 1.44
C9orf3-209ENST00000460573 CLEC1BQ9P126 229 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 TSC2P49815 1807 aa24.02■■□□□ 1.44
C9orf3-209ENST00000460573 CPB1P15086 417 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 ASPAP45381 313 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 TPM4P67936 248 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 TSPY1Q01534 308 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 MIIPQ5JXC2 388 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 GBP6Q6ZN66 633 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 OR6B3Q8NGW1 331 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 LMO3Q8TAP4 145 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 FAM200AQ8TCP9 573 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 TSPY26PQ9H489 355 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 CBX8Q9HC52 389 aa24.01■■□□□ 1.43
C9orf3-209ENST00000460573 LIMA1Q9UHB6 759 aaKnown RBP24.01■■□□□ 1.43
C9orf3-209ENST00000460573 USP15Q9Y4E8 981 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-209ENST00000460573 WDR27A2RRH5 827 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 SPDYE4A6NLX3 237 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 GLP2RO95838 553 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 ATF2P15336 505 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 EPCAMP16422 314 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 HOXB8P17481 243 aaPredicted RBP24■■□□□ 1.43
C9orf3-209ENST00000460573 ARPP19P56211 112 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 KRT31Q15323 416 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 OSTM1Q86WC4 334 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 KREMEN2Q8NCW0 462 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 VN1R2Q8NFZ6 395 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 OR10T2Q8NGX3 314 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 NT5C1BQ96P26 610 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 MRPL45Q9BRJ2 306 aaKnown RBP24■■□□□ 1.43
C9orf3-209ENST00000460573 DNAI2Q9GZS0 605 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 HSD3B7Q9H2F3 369 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 SMYD3Q9H7B4 428 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 AFF4Q9UHB7 1163 aaKnown RBP24■■□□□ 1.43
C9orf3-209ENST00000460573 FBXW11Q9UKB1 542 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 CDH9Q9ULB4 789 aa24■■□□□ 1.43
C9orf3-209ENST00000460573 GPR37L1O60883 481 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 LRRN2O75325 713 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 TBXAS1P24557 533 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-209ENST00000460573 ELF1P32519 619 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 ZNF445P59923 1031 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 EXOC3L4Q17RC7 722 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 UVSSAQ2YD98 709 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 SCARA5Q6ZMJ2 495 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 CCDC149Q6ZUS6 474 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 UNC93AQ86WB7 457 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 C2orf15Q8WU43 125 aaKnown RBP23.99■■□□□ 1.43
C9orf3-209ENST00000460573 ELMO3Q96BJ8 720 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 FAM81BQ96LP2 452 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 APOL5Q9BWW9 433 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 MAN1C1Q9NR34 630 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 GCNT4Q9P109 453 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 HSFX1Q9UBD0 423 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 RAPGEFL1Q9UHV5 662 aa23.99■■□□□ 1.43
C9orf3-209ENST00000460573 A8MXQ7 604 aa23.98■■□□□ 1.43
C9orf3-209ENST00000460573 PES1O00541 588 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 TRIM21P19474 475 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 CDH8P55286 799 aa23.98■■□□□ 1.43
C9orf3-209ENST00000460573 YWHAEP62258 255 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 RBM10P98175 930 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 MAPRE1Q15691 268 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 NFE2Q16621 373 aaPredicted RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 INTS6LQ5JSJ4 861 aaKnown RBP23.98■■□□□ 1.43
C9orf3-209ENST00000460573 LIN9Q5TKA1 542 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms