RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SLC7A14Q8TBB6 771 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 SYT15Q9BQS2 421 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 TMLHEQ9NVH6 421 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-206ENST00000459895 COG5Q9UP83 839 aa13.73□□□□□ -0.21
COL18A1-206ENST00000459895 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 SEC24AO95486 1093 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 C8AP07357 584 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
COL18A1-206ENST00000459895 ZNF18P17022 549 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 KCNQ1P51787 676 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 CDH8P55286 799 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 TSPY1Q01534 308 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 KRT31Q15323 416 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
COL18A1-206ENST00000459895 DPH6Q7L8W6 267 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 MYLPFQ96A32 169 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 OXCT2Q9BYC2 517 aaPredicted RBP13.72□□□□□ -0.21
COL18A1-206ENST00000459895 NAT10Q9H0A0 1025 aaKnown RBP13.72□□□□□ -0.21
COL18A1-206ENST00000459895 INTS2Q9H0H0 1204 aaKnown RBP13.72□□□□□ -0.21
COL18A1-206ENST00000459895 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 CD207Q9UJ71 328 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 YIPF1Q9Y548 306 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 INSL5Q9Y5Q6 135 aa13.72□□□□□ -0.21
COL18A1-206ENST00000459895 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 PMM2O15305 246 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 P4HA2O15460 535 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ATP2C2O75185 946 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ABLIM3O94929 683 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 P4HA1P13674 534 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 CD58P19256 250 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 LMO2P25791 158 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 PCSK1P29120 753 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 LHX1P48742 406 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ZNF165P49910 485 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 APBA1Q02410 837 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ADCY1Q08828 1119 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 INCA1Q0VD86 236 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 LRMPQ12912 555 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.21
COL18A1-206ENST00000459895 IQCB1Q15051 598 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 LRRTM3Q86VH5 581 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ARHGEF19Q8IW93 802 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 THEM5Q8N1Q8 247 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 LMO3Q8TAP4 145 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ZNF707Q96C28 371 aaPredicted RBP13.71□□□□□ -0.21
COL18A1-206ENST00000459895 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 LPIN3Q9BQK8 851 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 RHOBTB2Q9BYZ6 727 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 SNX25Q9H3E2 840 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 CBX8Q9HC52 389 aa13.71□□□□□ -0.21
COL18A1-206ENST00000459895 ABI2Q9NYB9 513 aaPredicted RBP13.71□□□□□ -0.21
COL18A1-206ENST00000459895 AFF4Q9UHB7 1163 aaKnown RBP13.71□□□□□ -0.21
COL18A1-206ENST00000459895 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
COL18A1-206ENST00000459895 GREB1Q4ZG55 1949 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 ZMYND10O75800 440 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 SOAT2O75908 522 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 C1RP00736 705 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 ATF2P15336 505 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 GPR17Q13304 367 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 CUL2Q13617 745 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 LEXMQ3ZCV2 418 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 MDH1BQ5I0G3 518 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 TPGS2Q68CL5 300 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 TRIM65Q6PJ69 517 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 UBR7Q8N806 425 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 ATAD1Q8NBU5 361 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 KAT5Q92993 513 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 TATDN2Q93075 761 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 ACBD6Q9BR61 282 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 CYP4F11Q9HBI6 524 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 ZDHHC7Q9NXF8 308 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
COL18A1-206ENST00000459895 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
COL18A1-206ENST00000459895 NOTCH4Q99466 2003 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 MYBPHLA2RUH7 354 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 A8MXQ7 604 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 PRRG1O14668 218 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 CCL16O15467 120 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 MBTPS2O43462 519 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 CILPO75339 1184 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 PDGFRBP09619 1106 aa13.69□□□□□ -0.22
COL18A1-206ENST00000459895 IL9P15248 144 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms