RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 KXD1Q9BQD3 176 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 RPP25Q9BUL9 199 aaKnown RBP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 TRMT61BQ9BVS5 477 aaKnown RBP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 DNAJC25Q9H1X3 360 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 HSPBP1Q9NZL4 362 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 PCDHB5Q9Y5E4 795 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 HELZP42694 1942 aaKnown RBP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 EP300Q09472 2414 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 MYH10P35580 1976 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 FAM237AA0A1B0GTK4 181 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 H0Y858 1186 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 GABRDO14764 452 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 CHADO15335 359 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 PI15O43692 258 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 STAU1O95793 577 aaKnown RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 OR4Q2P0C623 313 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 HAPLN1P10915 354 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 MYL4P12829 197 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 POLR2BP30876 1174 aaKnown RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 HOXD13P35453 343 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 AP3M2P53677 418 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 KRT85P78386 507 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 FCHO2Q0JRZ9 810 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 PSMD6Q15008 389 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 ANGPT1Q15389 498 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 MAPRE1Q15691 268 aaKnown RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 CFAP221Q4G0U5 840 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 SLC39A12Q504Y0 691 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 WSCD1Q658N2 575 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 ZC3H14Q6PJT7 736 aaKnown RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 ZNF852Q6ZMS4 543 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 SLC9A9Q8IVB4 645 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 PDCL2Q8N4E4 241 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 XXYLT1Q8NBI6 393 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 ATAD1Q8NBU5 361 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 SHKBP1Q8TBC3 707 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 TCEAL4Q96EI5 215 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 PGLYRP2Q96PD5 576 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 GCNAQ96QF7 691 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 FGFBP2Q9BYJ0 223 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 BCO2Q9BYV7 579 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 SCAND2PQ9GZW5 306 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 CRISPLD1Q9H336 500 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 BRD9Q9H8M2 597 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 PDE11AQ9HCR9 933 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 AGPAT3Q9NRZ7 376 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 UXTQ9UBK9 157 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-228ENST00000459788 FBXO4Q9UKT5 387 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 AGAP1Q9UPQ3 857 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 OTOGLQ3ZCN5 2332 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 DMDP11532 3685 aa10.76□□□□□ -0.69
HDLBP-228ENST00000459788 TGFB1I1O43294 461 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 KIF20AO95235 890 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 CSH1P0DML2 217 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 CSH2P0DML3 217 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 PFKLP17858 780 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 ATICP31939 592 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 MAGEA11P43364 429 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 RPL10AP62906 217 aaKnown RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 PLCB2Q00722 1185 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 SNW1Q13573 536 aaKnown RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 KNOP1Q1ED39 458 aaKnown RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 ARHGAP29Q52LW3 1261 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 INTS6LQ5JSJ4 861 aaKnown RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 C1orf210Q8IVY1 113 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 SCFD1Q8WVM8 642 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 TRMT2BQ96GJ1 504 aaKnown RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 MYRFLQ96LU7 910 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 FNBP1Q96RU3 617 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 CGRRF1Q99675 332 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 FAM126AQ9BYI3 521 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 PLA2G2FQ9BZM2 168 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 IKZF4Q9H2S9 585 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 PCIF1Q9H4Z3 704 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 TASP1Q9H6P5 420 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 C8orf33Q9H7E9 229 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 ZNF334Q9HCZ1 680 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-228ENST00000459788 LTB4R2Q9NPC1 389 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 SIX4Q9UIU6 781 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 L1RE1Q9UN81 338 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 SLC27A5Q9Y2P5 690 aa10.75□□□□□ -0.69
HDLBP-228ENST00000459788 A0A1W2PQ27 194 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 A0A1W2PQ64 194 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 A0A1W2PQD8 194 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 A0A1W2PRU2 124 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 GOLGA8IPA6NC78 632 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 GOLGA8JA6NMD2 632 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 PDXKO00764 312 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ZNF263O14978 683 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ACTN4O43707 911 aaKnown RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 TACC1O75410 805 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ATF6P18850 670 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 WARSP23381 471 aaKnown RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 WNT7BP56706 349 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms