RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PANX2Q96RD6 677 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 IMPG2Q9BZV3 1241 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.65
USP39-210ENST00000459775 SPTLC3Q9NUV7 552 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 PRG3Q9Y2Y8 225 aaPredicted RBP11.02□□□□□ -0.65
USP39-210ENST00000459775 DERAQ9Y315 318 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 TBKBP1A7MCY6 615 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 ZBBXA8MT70 800 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 NT5C1B-RDH14C9J2C7 533 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 CCP110O43303 1012 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 CFHP08603 1231 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 SOX5P35711 763 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
USP39-210ENST00000459775 BRCC3P46736 316 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 MFAP3P55082 362 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 LILRA4P59901 499 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 WDR5P61964 334 aaKnown RBP11.01□□□□□ -0.65
USP39-210ENST00000459775 PTK2Q05397 1052 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 TMEM270Q6UE05 265 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 CD300LGQ6UXG3 332 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 PALB2Q86YC2 1186 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 SHC3Q92529 594 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 TWNKQ96RR1 684 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.653e-12■■□□□ 13.8
USP39-210ENST00000459775 MRPL45Q9BRJ2 306 aaKnown RBP11.01□□□□□ -0.65
USP39-210ENST00000459775 NIF3L1Q9GZT8 377 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 HAUS4Q9H6D7 363 aa11.01□□□□□ -0.65
USP39-210ENST00000459775 USP27XA6NNY8 438 aa11□□□□□ -0.65
USP39-210ENST00000459775 PODXLO00592 558 aa11□□□□□ -0.65
USP39-210ENST00000459775 SKIP12755 728 aa11□□□□□ -0.65
USP39-210ENST00000459775 STAT1P42224 750 aa11□□□□□ -0.65
USP39-210ENST00000459775 BCAR1P56945 870 aa11□□□□□ -0.65
USP39-210ENST00000459775 CYP27A1Q02318 531 aa11□□□□□ -0.65
USP39-210ENST00000459775 GCNT1Q02742 428 aa11□□□□□ -0.65
USP39-210ENST00000459775 RNASELQ05823 741 aaKnown RBP11□□□□□ -0.65
USP39-210ENST00000459775 ASIC2Q16515 512 aa11□□□□□ -0.65
USP39-210ENST00000459775 MEA1Q16626 185 aa11□□□□□ -0.65
USP39-210ENST00000459775 UPP1Q16831 310 aa11□□□□□ -0.65
USP39-210ENST00000459775 ZNF571Q7Z3V5 609 aaPredicted RBP11□□□□□ -0.65
USP39-210ENST00000459775 TMEM173Q86WV6 379 aaPredicted RBP11□□□□□ -0.65
USP39-210ENST00000459775 LMNTD2Q8IXW0 634 aa11□□□□□ -0.65
USP39-210ENST00000459775 FAM122AQ96E09 287 aa11□□□□□ -0.65
USP39-210ENST00000459775 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
USP39-210ENST00000459775 NHEJ1Q9H9Q4 299 aaPredicted RBP11□□□□□ -0.65
USP39-210ENST00000459775 IL23AQ9NPF7 189 aa11□□□□□ -0.65
USP39-210ENST00000459775 CISHQ9NSE2 258 aa11□□□□□ -0.65
USP39-210ENST00000459775 AIPL1Q9NZN9 384 aa11□□□□□ -0.65
USP39-210ENST00000459775 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
USP39-210ENST00000459775 FBXL5Q9UKA1 691 aa11□□□□□ -0.65
USP39-210ENST00000459775 R3HCC1Q9Y3T6 440 aaKnown RBP11□□□□□ -0.65
USP39-210ENST00000459775 PCDHB4Q9Y5E5 795 aa11□□□□□ -0.65
USP39-210ENST00000459775 KPNA7A9QM74 516 aa11□□□□□ -0.65
USP39-210ENST00000459775 ZC3H11AO75152 810 aaKnown RBP eCLIP11□□□□□ -0.65
USP39-210ENST00000459775 B3GAT3O94766 335 aa11□□□□□ -0.65
USP39-210ENST00000459775 TPPPO94811 219 aa11□□□□□ -0.65
USP39-210ENST00000459775 CCDC175P0C221 793 aa11□□□□□ -0.65
USP39-210ENST00000459775 FAM163BP0C2L3 166 aa11□□□□□ -0.65
USP39-210ENST00000459775 KLHL30Q0D2K2 578 aa11□□□□□ -0.65
USP39-210ENST00000459775 GRIK3Q13003 919 aa11□□□□□ -0.65
USP39-210ENST00000459775 SOWAHAQ2M3V2 549 aa11□□□□□ -0.65
USP39-210ENST00000459775 TDRD12Q587J7 1177 aaKnown RBP11□□□□□ -0.65
USP39-210ENST00000459775 SDE2Q6IQ49 451 aa11□□□□□ -0.65
USP39-210ENST00000459775 NYAP1Q6ZVC0 841 aa11□□□□□ -0.65
USP39-210ENST00000459775 FAM71AQ8IYT1 594 aa11□□□□□ -0.65
USP39-210ENST00000459775 ABI1Q8IZP0 508 aa11□□□□□ -0.65
USP39-210ENST00000459775 OLIG1Q8TAK6 271 aa11□□□□□ -0.65
USP39-210ENST00000459775 WHAMMQ8TF30 809 aa11□□□□□ -0.65
USP39-210ENST00000459775 B3GALT6Q96L58 329 aa11□□□□□ -0.65
USP39-210ENST00000459775 ZSWIM1Q9BR11 485 aa11□□□□□ -0.65
USP39-210ENST00000459775 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
USP39-210ENST00000459775 NRDE2Q9H7Z3 1164 aa11□□□□□ -0.65
USP39-210ENST00000459775 SCN1AP35498 2009 aa11□□□□□ -0.65
USP39-210ENST00000459775 ZNF263O14978 683 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 ABL1P00519 1130 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 PDGFRBP09619 1106 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 FOSL1P15407 271 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 LMO2P25791 158 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 RFC2P35250 354 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 OR1G1P47890 313 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 FPGSQ05932 587 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 GFPT1Q06210 699 aaPredicted RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 TUSC3Q13454 348 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 TIGD5Q53EQ6 642 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 TMEM240Q5SV17 173 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 C9orf50Q5SZB4 431 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 KRT77Q7Z794 578 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 COLGALT2Q8IYK4 626 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 UBR7Q8N806 425 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 SLX1AQ9BQ83 275 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 BCO2Q9BYV7 579 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 UBN1Q9NPG3 1134 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 SLC38A7Q9NVC3 462 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 TRMT1Q9NXH9 659 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 ADAMTS1Q9UHI8 967 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 L1RE1Q9UN81 338 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 ZNF232Q9UNY5 417 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 REXO2Q9Y3B8 237 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms