RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 AFG3L2Q9Y4W6 797 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 A0A0G2JMZ2 1700 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 SMCHD1A6NHR9 2005 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 hCG_1818297A0A087WSY0 165 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 TCRBV5S1A1TA0A578 114 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 TCP11X1B4DZS4 312 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 NOP56O00567 594 aaKnown RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 ACKR2O00590 384 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 ALOX15BO15296 676 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 MGRN1O60291 552 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 MSCO60682 206 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 RNF8O76064 485 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 ATF7P17544 494 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 CD58P19256 250 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 CHKAP35790 457 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 IFNAR2P48551 515 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 ARSEP51690 589 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 TAS2R40P59535 323 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 CBLBQ13191 982 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF268Q14587 947 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 MTFR1Q15390 333 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 HIF1AQ16665 826 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 KYNUQ16719 465 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 FAM47CQ5HY64 1035 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 NUGGCQ68CJ6 796 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 VSTM1Q6UX27 236 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 TSHZ1Q6ZSZ6 1077 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 BBS12Q6ZW61 710 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 PASD1Q8IV76 773 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 CFAP61Q8NHU2 1237 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 AFG1LQ8WV93 481 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 MCEEQ96PE7 176 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 ACO2Q99798 780 aaKnown RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 HEMGNQ9BXL5 484 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 VRTNQ9H8Y1 702 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 IFT122Q9HBG6 1241 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 PRMT7Q9NVM4 692 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 EURLQ9NYK6 297 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 RPL26L1Q9UNX3 145 aaKnown RBP9.32□□□□□ -0.92
HDAC3-202ENST00000459727 NAALADL1Q9UQQ1 740 aa9.32□□□□□ -0.92
HDAC3-202ENST00000459727 PTPRJQ12913 1337 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 RLFQ13129 1914 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 LRRD1A4D1F6 860 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 CFAP69A5D8W1 941 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF487B1APH4 448 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 NFKBIEO00221 500 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 DNM1LO00429 736 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 MCF2LO15068 1137 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TM9SF1O15321 606 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 HBP1O60381 514 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 HMGCRP04035 888 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 KRT3P12035 628 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 ATP4AP20648 1035 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 PROZP22891 400 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 PSMA2P25787 234 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 STIP1P31948 543 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 PCK1P35558 622 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TCF7P36402 384 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 CDKN2BP42772 138 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 PHKA2P46019 1235 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SOX10P56693 466 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 GEMIN4P57678 1058 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 GPS1Q13098 491 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TFDP2Q14188 446 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 OASLQ15646 514 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SEPT7Q16181 437 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TAZQ16635 292 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 FAM187BQ17R55 369 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 GALNTL6Q49A17 601 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 PREPLQ4J6C6 727 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 RNASEH2BQ5TBB1 312 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 ANGEL2Q5VTE6 544 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 FYB2Q5VWT5 728 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SPOPLQ6IQ16 392 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 GPAT2Q6NUI2 795 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SEPT14Q6ZU15 432 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TRABD2AQ86V40 505 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SRRM1Q8IYB3 904 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 ANKRD42Q8N9B4 389 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 OR5B17Q8NGF7 314 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SLC35B2Q8TB61 432 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 RSAD2Q8WXG1 361 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 WNK4Q96J92 1243 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 TUBB6Q9BUF5 446 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 BCO2Q9BYV7 579 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 MTMR12Q9C0I1 747 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SMARCAD1Q9H4L7 1026 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 ASB7Q9H672 318 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 RPF1Q9H9Y2 349 aaKnown RBP9.31□□□□□ -0.92
HDAC3-202ENST00000459727 RSAD1Q9HA92 442 aa9.31□□□□□ -0.92
HDAC3-202ENST00000459727 SAYSD1Q9NPB0 183 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms