RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CA3P07451 260 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 TMEM253P0C7T8 217 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PNMA6AP0CW24 399 aaPredicted RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 KCNE1P15382 129 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 CYP11B1P15538 503 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 CYP3A5P20815 502 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 GNA15P30679 374 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 POLR2BP30876 1174 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 TAP1Q03518 808 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 BFSP2Q13515 415 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 FBXO47Q5MNV8 452 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 RHOT2Q8IXI1 618 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 TMEM192Q8IY95 271 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 RPUSD2Q8IZ73 545 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 SYCE1Q8N0S2 351 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 SLC35F6Q8N357 371 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 C1orf127Q8N9H9 656 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 RBBP8NLQ8NC74 664 aaPredicted RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 SLC30A5Q8TAD4 765 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PPP1R13LQ8WUF5 828 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 KAT5Q92993 513 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PGBD4Q96DM1 585 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 HPDLQ96IR7 371 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 SYT11Q9BT88 431 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 EIF2AQ9BY44 585 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 NXF3Q9H4D5 531 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 APOBEC3GQ9HC16 384 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 UBN1Q9NPG3 1134 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS50-207ENST00000458530 FAM105AQ9NUU6 356 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PARP2Q9UGN5 583 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 NOCTQ9UK39 431 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 NENFQ9UMX5 172 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 ST3GAL5Q9UNP4 418 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 CNTN6Q9UQ52 1028 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 NOC2LQ9Y3T9 749 aaKnown RBP9.54□□□□□ -0.88
VPS50-207ENST00000458530 JRKLQ9Y4A0 524 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 IPPQ9Y573 584 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 NUB1Q9Y5A7 615 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 SCN1AP35498 2009 aa9.54□□□□□ -0.88
VPS50-207ENST00000458530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.53□□□□□ -0.88
VPS50-207ENST00000458530 URI1O94763 535 aaPredicted RBP9.53□□□□□ -0.88
VPS50-207ENST00000458530 LSM8O95777 96 aaKnown RBP9.53□□□□□ -0.88
VPS50-207ENST00000458530 CHRNA1P02708 482 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 PAEPP09466 180 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 MYBL1P10243 752 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 ITGA4P13612 1032 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 PAX3P23760 479 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 CCL23P55773 120 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 SPOPLQ6IQ16 392 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 TMEM270Q6UE05 265 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 NOP9Q86U38 636 aaKnown RBP9.53□□□□□ -0.88
VPS50-207ENST00000458530 SLC47A2Q86VL8 602 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 MSANTD4Q8NCY6 345 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 LNX1Q8TBB1 728 aaPredicted RBP9.53□□□□□ -0.88
VPS50-207ENST00000458530 RFFLQ8WZ73 363 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 APOL6Q9BWW8 343 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 BCO2Q9BYV7 579 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 LACRTQ9GZZ8 138 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 XYLT2Q9H1B5 865 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 TRPV6Q9H1D0 765 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 KCNH6Q9H252 994 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 ERVK-5Q9HDB9 667 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 LMCD1Q9NZU5 365 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 AGAP1Q9UPQ3 857 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 GIT1Q9Y2X7 761 aa9.53□□□□□ -0.88
VPS50-207ENST00000458530 RCCD1A6NED2 376 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 THAP12O43422 761 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 PARNO95453 639 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 CST3P01034 146 aaPredicted RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 ACO1P21399 889 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 ASPAP45381 313 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 NSFP46459 744 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 TUBB4BP68371 445 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 FMO1Q01740 532 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 CKAP4Q07065 602 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 STILQ15468 1287 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 TRIM71Q2Q1W2 868 aaKnown RBP9.52□□□□□ -0.89
VPS50-207ENST00000458530 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SV2CQ496J9 727 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 XKR4Q5GH76 650 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 UBXN11Q5T124 520 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 TAF3Q5VWG9 929 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 ALKAL1Q6UXT8 129 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SCARA5Q6ZMJ2 495 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 UBR7Q8N806 425 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 MNS1Q8NEH6 495 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 MYRIPQ8NFW9 859 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SLC20A1Q8WUM9 679 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SCLYQ96I15 445 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 WDR24Q96S15 920 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 SLC9A7Q96T83 725 aa9.52□□□□□ -0.89
VPS50-207ENST00000458530 ARID3AQ99856 593 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms