RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 APBB1IPQ7Z5R6 666 aaPredicted RBP17.33■□□□□ 0.37
CAPN13-203ENST00000458085 ANKS1BQ7Z6G8 1248 aa17.33■□□□□ 0.37
CAPN13-203ENST00000458085 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.37
CAPN13-203ENST00000458085 HEXIM2Q96MH2 286 aaKnown RBP17.33■□□□□ 0.37
CAPN13-203ENST00000458085 MRPL45Q9BRJ2 306 aaKnown RBP17.33■□□□□ 0.37
CAPN13-203ENST00000458085 TRIM31Q9BZY9 425 aa17.33■□□□□ 0.37
CAPN13-203ENST00000458085 GTF2IRD1Q9UHL9 959 aa17.33■□□□□ 0.37
CAPN13-203ENST00000458085 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.33■□□□□ 0.37
CAPN13-203ENST00000458085 DERAQ9Y315 318 aa17.33■□□□□ 0.37
CAPN13-203ENST00000458085 CEP83Q9Y592 693 aa17.33■□□□□ 0.37
CAPN13-203ENST00000458085 SNX9Q9Y5X1 595 aa17.33■□□□□ 0.37
CAPN13-203ENST00000458085 GNAT1P11488 350 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 ELNP15502 786 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 CCND3P30281 292 aaPredicted RBP17.33■□□□□ 0.36
CAPN13-203ENST00000458085 GJC1P36383 396 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 ATP13A4Q4VNC1 1196 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 C12orf29Q8N999 325 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
CAPN13-203ENST00000458085 SMC1BQ8NDV3 1235 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 MAGOHBQ96A72 148 aaKnown RBP17.33■□□□□ 0.36
CAPN13-203ENST00000458085 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 DPH5Q9H2P9 285 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 PARP2Q9UGN5 583 aa17.33■□□□□ 0.36
CAPN13-203ENST00000458085 SMIM28A0A1B0GU29 152 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 F8VP50 259 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 GOLGA8SH3BPF8 625 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 MED7O43513 233 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 ERBB2P04626 1255 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 PTGIRP43119 386 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 GYS2P54840 703 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 DR1Q01658 176 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 HLTFQ14527 1009 aaKnown RBP eCLIP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 NME8Q8N427 588 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 UBA3Q8TBC4 463 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 UBE2Q2Q8WVN8 375 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 UPF3AQ9H1J1 476 aaKnown RBP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 GOLGA2P5Q9HBQ8 144 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 M0QYV0 167 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 SEPT4O43236 478 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 HCRTO43612 131 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 ADAMTS4O75173 837 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 SYF2O95926 243 aaKnown RBP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 SSR1P43307 286 aaKnown RBP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 KCNJ1P48048 391 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 SOX4Q06945 474 aaPredicted RBP17.32■□□□□ 0.36
CAPN13-203ENST00000458085 MYO1EQ12965 1108 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 C9orf57Q5W0N0 161 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 C3orf20Q8ND61 904 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 BEST2Q8NFU1 509 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 SEC14L1Q92503 715 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 OSBPL7Q9BZF2 842 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 KLHL11Q9NVR0 708 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 RNF186Q9NXI6 227 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 IPPQ9Y573 584 aa17.32■□□□□ 0.36
CAPN13-203ENST00000458085 FSCN2O14926 492 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 CTSHP09668 335 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 HSPA6P17066 643 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 FLT3P36888 993 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 GGCXP38435 758 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 GPD2P43304 727 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 AARSP49588 968 aaKnown RBP eCLIP17.31■□□□□ 0.36
CAPN13-203ENST00000458085 FAM193AP78312 1265 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 CLUL1Q15846 466 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 FAM47CQ5HY64 1035 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 TXNRD3NBQ6F5E7 133 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 TAF2Q6P1X5 1199 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 DCUN1D2Q6PH85 259 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 JAMLQ86YT9 394 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 JOSD2Q8TAC2 188 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 LPIN3Q9BQK8 851 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 IP6K2Q9UHH9 426 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 RARBP10826 455 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 VDRP11473 427 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 RFC1P35251 1148 aaPredicted RBP17.31■□□□□ 0.36
CAPN13-203ENST00000458085 MRPS6P82932 125 aaKnown RBP17.31■□□□□ 0.36
CAPN13-203ENST00000458085 CUL1Q13616 776 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 CNGA2Q16280 664 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 CYP1B1Q16678 543 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 CCDC137Q6PK04 289 aaKnown RBP17.31■□□□□ 0.36
CAPN13-203ENST00000458085 SESTD1Q86VW0 696 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 RHOT1Q8IXI2 618 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 C1orf54Q8WWF1 131 aa17.31■□□□□ 0.36
CAPN13-203ENST00000458085 MEIS3P2A8K0S8 358 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 SPTLC1O15269 473 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PSTPIP1O43586 416 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 KPNA6O60684 536 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 CHRNA3P32297 505 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 MAN1A1P33908 653 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 PSMC1P62191 440 aaKnown RBP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 NNTQ13423 1086 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 SGO2Q562F6 1265 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 XKR4Q5GH76 650 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 SMYD5Q6GMV2 418 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 TWF2Q6IBS0 349 aaKnown RBP17.3■□□□□ 0.36
CAPN13-203ENST00000458085 XYLT1Q86Y38 959 aa17.3■□□□□ 0.36
CAPN13-203ENST00000458085 NT5C1AQ9BXI3 368 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms