RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CXorf38Q8TB03 319 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 ZNF473Q8WTR7 871 aaKnown RBP17.64■□□□□ 0.41
CCDC43-202ENST00000457422 CENPTQ96BT3 561 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 SLC10A4Q96EP9 437 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 SCLT1Q96NL6 688 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 CCT8L2Q96SF2 557 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 ASB7Q9H672 318 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 SLC45A1Q9Y2W3 748 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 SCN4AP35499 1836 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 A0A087WZ62 844 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 LACTBL1A8MY62 500 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 RGS16O15492 202 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 ZNF286BP0CG31 522 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 STAG3L1P0CL83 205 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 TMOD1P28289 359 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 POLR2BP30876 1174 aaKnown RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 MMP13P45452 471 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 ITGA8P53708 1063 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 LMNB2Q03252 620 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 KYAT1Q16773 422 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 ZNF467Q7Z7K2 595 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 UHMK1Q8TAS1 419 aaKnown RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 FDXACB1Q9BRP7 624 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 SYT17Q9BSW7 474 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 PDZD7Q9H5P4 517 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 DDX56Q9NY93 547 aaKnown RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 AKT3Q9Y243 479 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 F8VP50 259 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 PI4K2BG5E9Z4 385 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 KRT1P04264 644 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 ATICP31939 592 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 SEC24CP53992 1094 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 PTPN20Q4JDL3 420 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 ATP13A4Q4VNC1 1196 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 JADE1Q6IE81 842 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 CPB2Q96IY4 423 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 KATNBL1Q9H079 304 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 STMN4Q9H169 189 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-202ENST00000457422 SDCBP2Q9H190 292 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 IVNS1ABPQ9Y6Y0 642 aa17.63■□□□□ 0.41
CCDC43-202ENST00000457422 GMNCA6NCL1 334 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 SMIM23A6NLE4 172 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 E7EVH7 732 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 TJP3O95049 919 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 VTNP04004 478 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 CD19P15391 556 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 KLRC2P26717 231 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 CHKAP35790 457 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 ADCY8P40145 1251 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 RAD23BP54727 409 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 WDR72Q3MJ13 1102 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 MFSD7Q6UXD7 560 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 ZNF365Q70YC5 407 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 POLNQ7Z5Q5 900 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 CCHCR1Q8TD31 782 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 FNIP1Q8TF40 1166 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 GGA2Q9UJY4 613 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 SIGLEC16A6NMB1 481 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 PDHXO00330 501 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 RASGRF2O14827 1237 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 LIASO43766 372 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 ADCYAP1R1P41586 468 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 VPS41P49754 854 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 CDH8P55286 799 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 SPOCD1Q6ZMY3 1216 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 RELL1Q8IUW5 271 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 EPS8L3Q8TE67 593 aaKnown RBP17.62■□□□□ 0.41
CCDC43-202ENST00000457422 C16orf70Q9BSU1 422 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 SMYD3Q9H7B4 428 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 CYP3A43Q9HB55 503 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 PPANQ9NQ55 473 aaKnown RBP17.62■□□□□ 0.41
CCDC43-202ENST00000457422 ANAPC5Q9UJX4 755 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 FAM169AQ9Y6X4 670 aa17.62■□□□□ 0.41
CCDC43-202ENST00000457422 TLDC2A0PJX2 215 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 STRNO43815 780 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 TTC4O95801 387 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 ITGB3P05106 788 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 ORC1Q13415 861 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 AUHQ13825 339 aaKnown RBP17.61■□□□□ 0.41
CCDC43-202ENST00000457422 ZFYVE27Q5T4F4 411 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 RAPGEF5Q92565 580 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 DDX23Q9BUQ8 820 aaKnown RBP17.61■□□□□ 0.41
CCDC43-202ENST00000457422 FOXP3Q9BZS1 431 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 FAM124BQ9H5Z6 455 aaPredicted RBP17.61■□□□□ 0.41
CCDC43-202ENST00000457422 ZNF408Q9H9D4 720 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.61■□□□□ 0.41
CCDC43-202ENST00000457422 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 CYTH4Q9UIA0 394 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 CITO14578 2027 aa17.61■□□□□ 0.41
CCDC43-202ENST00000457422 hCG_1818297A0A087WSY0 165 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 CILPO75339 1184 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 KRT10P13645 584 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 ARF4P18085 180 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 PTPN11Q06124 597 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 TFDP3Q5H9I0 405 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 ERMARDQ5T6L9 678 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms